Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2285 ATGGAACCACATCTAAATGCAGCCTCCATTCTCAGAACCACCAGCAGCAACATACCATATTCTTGTCTTCCTCAACCATTCCTGTCTCTTACTACAAGGATGCTATCTTCTTCTTCATCTTCATCTTCTTCAACAACCCCTTCATCTGAAACAAGAACAGCTTACTCTTCTTCAAGCCCTAACCCTTCATTCAAGAACCTTTCTCTATTCTCCAACAATCATTCTCTTCAAAGTATGACGCTTTCTAAGTGTTTCTCTCACTCTGGACCCACTTATGCAATACCGGTTTCTGGGTTGGTTGAATCTGGTGAAGTAGAGTCTCTTGTCGTGGTTTCGTTTTATAAGTTTGCGGATTTCCCTGATCATGCTGTTTTGCGTGTGCCCTTGAAGCAATTATGTCAACAATTGCGTGTTTCAGGCGGTATCATTCTTGCGCCTGAAGGAATTAATGGCAGCCTATGCGGCACGCGGGAGTCGGTGGAGAAAGTTCTTGCATTTATTCAGAGTGATGATCGTCTGAAGGGGCTAAGACGTATTGAATCGCCTGTCAGTCCTGAGGAGGAGGCCATCCATCAAGGTAATCATGGACACAGTGCCAGTTCTCCTCTTGCTGCTGGGGAAGACACACCTTTCCGATGGGATCATGTTAGAGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACGGTATCACCTATTGAAAGGGTTGGAAAATATATTGGCCCAAAGGAATGGAATTCTTTGATTAGCGATCCTGATACTGTGGTAATTGATGTGCGGAATAACTATGAAACAAGAATAGGAAAGTTCAAAGGAGCAGTTGATCCTTGTACGACATCATTTCGTGAATTCCCCTCTTGGGTTGAGGAACGTTTTGAGCTTACCAGAAAAGATGTTGAGCATGCAAAAGATGATGTAAACCATTCAGACCAAATTGCTGAAAAAGAAATGAAGAATCAGAAACAACATTTGCCACGTGTTGCAATGTATTGCACCGGGGGTATTCGTTGTGAGAAAGCTTCAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATCCTGAAATATCTTGAGGAAGTTCCAGAGAGACAAAGTCTTTGGGAAGGAGAGTGCTTTGTTTTCGACAAGAGAGTCTCTGTCGAGCATGGTTTGGCACAAGGAAATTTCAAGCTGTGCTATGGTTGTAAGCAGCCTGTGAGTGACACTGACATGGAATCCCCAGAATATGAATATGGAGTCTCCTGTCCTTACTGTTTTGCACAGAAATCAGAAGAAGAAAAAGAGAGGGCTCGAGCTCGACAAAAACAATTTGAGAGATGGGGGATCATAGGTGGTCCTGATAAGGGCCGCCGGCCGACACATAAACAGGACAGTGCTAGCAGGGATGAAAATCAACTTTCAAAGTCTGTTTAA 1437 0.4363 MEPHLNAASILRTTSSNIPYSCLPQPFLSLTTRMLSSSSSSSSSTTPSSETRTAYSSSSPNPSFKNLSLFSNNHSLQSMTLSKCFSHSGPTYAIPVSGLVESGEVESLVVVSFYKFADFPDHAVLRVPLKQLCQQLRVSGGIILAPEGINGSLCGTRESVEKVLAFIQSDDRLKGLRRIESPVSPEEEAIHQGNHGHSASSPLAAGEDTPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYIGPKEWNSLISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEERFELTRKDVEHAKDDVNHSDQIAEKEMKNQKQHLPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPERQSLWEGECFVFDKRVSVEHGLAQGNFKLCYGCKQPVSDTDMESPEYEYGVSCPYCFAQKSEEEKERARARQKQFERWGIIGGPDKGRRPTHKQDSASRDENQLSKSV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2285 478 MobiDBLite consensus disorder prediction 184 207 - -
Mtr5g2285 478 CDD RHOD_YceA 239 366 - -
Mtr5g2285 478 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 105 459 IPR020936 -
Mtr5g2285 478 MobiDBLite consensus disorder prediction 452 470 - -
Mtr5g2285 478 ProSiteProfiles Rhodanese domain profile. 252 373 IPR001763 -
Mtr5g2285 478 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 105 459 - -
Mtr5g2285 478 Hamap tRNA uridine(34) hydroxylase [trhO]. 106 410 IPR020936 -
Mtr5g2285 478 Pfam Rhodanese-like domain 245 366 IPR001763 -
Mtr5g2285 478 MobiDBLite consensus disorder prediction 437 478 - -
Mtr5g2285 478 MobiDBLite consensus disorder prediction 37 62 - -
Mtr5g2285 478 Gene3D - 100 225 - -
Mtr5g2285 478 Pfam UPF0176 acylphosphatase like domain 109 224 IPR040503 -
Mtr5g2285 478 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 221 398 IPR036873 -
Mtr5g2285 478 Gene3D - 226 408 IPR036873 -
Mtr5g2285 478 SMART rhod_4 242 370 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2285 Mtr-Chr5 29970617 29975030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2285 104 472 Sulfurtransferasese or Rhodanese AT2G40760 76.280 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2285 - - mtr:MTR_5g067730 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2285 5 29970617 29975030 Mtr5g2285 5 29970617 29975030 ECH