Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2283 ATGATCAACATTGAAGTTCTATCAAATATTGGTGTCATATACTATGCATTCCTAAGTGGTTTAGAGATGAACTTGAATACCATTTTACATGTTAAAAAGAAATCTGCAACTATTGCAATTTTTGGAATCATTTTTCCAATGGTGATGGGACCGGCTTTATACCTTCTACATCGAAATTTTTATGGAAAGGGTGATGGATCTGAACTTGAAGAAAATACAACAAATGCTTGTGTAATATGGACTTTAGTTCTCACTGTGACAGGTTTTCCAGTCGTAGCTCACACCCTTTCTGAGCTCAAACTTCTTTATACTGGTCTTGGTAAGGTTGCATTAACAACAGCTATGATCAGTGACACATATGCTTGGATTTTATTCATATTATTTGTTCCATTTTCAGTTAATGGTACAAGTGCAATATATCCAGTGTTAAGCACTGTAATATTTGTTTTCATTTGCATCTTTGTGGTGCATCCTATAATCGCAAAAGTCATTAATCGCAAGACAGAAAGAGATGAATGGGATGGTAACCAATTAGTCTTTGTGGTGATGGGACTTTTTGTTTTCTCATACATAACTGATATTCTTGGTACACATGACGTTGTTGGTGCATTTGTATACGGGTTGATTTTACCTCACGGTAAATTTGCTGACATGGTCACATCAATGACTAATGATTTTGGTGGTGGGTTTCTAGCACCAATTTACTTTATTGGCAGTGGATTGAAACTCATGTTCGTGCCCGTTTTCTATCAACCAAGTTGGCCCTTTACACTTATCATTATACTCTTGATGTGTGTTCTAAAGATTCTAAGCACTTTGTTTTCCACTTTCTTGTTTGGCATGCGTACTCGAGATGGTTTTGCTTTAGGCTTGCTTCTCAATACAAAGGGTGTCGTTGCATTAATAATGCTCAACATTTCATGGGATAGAATGATTATTACTCCACCAACCTATGTTGTTTTAACATCAGCAGTTATTTTAATGACTATAGTGGTAGCTCCCATCATAAATGTCATATACAAGCCCAAAAAGAGATATGAGCAAAACAAGCTAAAGACTATACAAAAGCTCAGACTTGATGCAGAGCTTAGGATTCTAGCATGTGTTCATAATACTCGTCAAGCTGTAGGGGTTATTAGCCTCATTGAATCTTTCAATGCCACTAGACTTTCCCCTATGCATATTTTTGCACTTTACCTTGTTGAACTCGTTGGACGTGATGGTGCACTTGTTGCTTCTCATATGGAGAAGCCTAGTGGCCAATCTGGAACACAAAATCTTACAAGATCCCAGATAGAGTTAGAAAGTATTGATAATAAATTTGAAGCACTCAGAGAGGCATATGATGCTATCAGAGTAGAAACGTTAAATGTTGTGTCCGAATATGCAACCATTCACGAAGACATATACAATTTAGTTAACGAAAAACATACAAGCTTGATTCTCCTTCCATTCCACAAACAACTAAGTCCGGAAGGTGCATTTGAAACAACTGATGTTGCGTTCAAAGATATAAACTTGAATGTGATGCAAAGTGCACCTTGCTCTGTGGGATTATTTGTTGATCGTAATCTTGGGTCCTTACCAAAAATGAATTTTCGTATTTGTATGATCTTTGTTGGAGGTCCTGATGATCGCGAAGCATTATCTGTCGCATGGAGGATGACAGGACACTTAGGAACCCAACTTCTAGTGGTTCGGATGCTCCTGTTTGGTAAAGCTGCAATAGTGGACACCACAAGTCATGATAAAGCAAGGGGCATATTATCTATTGTAATGGATAGTGAGAAGCAAAAGGAATTAGATGATGAGTATGTTAATGGATTTAGATTGACAACGATGAACAACAATGATTCTATATCTTATTCAGAAGTTGATGTCCATTCTGCTGAAGATATTCCCACATCCCTCAATGAGATAGAAAAAATTGGTTGCGATTTATACATAGTTGGACAGGGAAATCGTAGGAACACTCGAGTCTTTTTAAACTTATTGGAATGGTGTGACTGTCCAGAACTTGGGGTTTTAGGGGATATTTTAGCATCAAACAATTTTGGTTCGGGCTCATCAGTGCTAGTTGTGCAACAATATGGGTATGGAGGAATGGTTTTGGGAAAGCAACCAAACCAGGTGAACGACAATAATGATGCTTTTGAGGTGTTGTAG 2166 0.3749 MINIEVLSNIGVIYYAFLSGLEMNLNTILHVKKKSATIAIFGIIFPMVMGPALYLLHRNFYGKGDGSELEENTTNACVIWTLVLTVTGFPVVAHTLSELKLLYTGLGKVALTTAMISDTYAWILFILFVPFSVNGTSAIYPVLSTVIFVFICIFVVHPIIAKVINRKTERDEWDGNQLVFVVMGLFVFSYITDILGTHDVVGAFVYGLILPHGKFADMVTSMTNDFGGGFLAPIYFIGSGLKLMFVPVFYQPSWPFTLIIILLMCVLKILSTLFSTFLFGMRTRDGFALGLLLNTKGVVALIMLNISWDRMIITPPTYVVLTSAVILMTIVVAPIINVIYKPKKRYEQNKLKTIQKLRLDAELRILACVHNTRQAVGVISLIESFNATRLSPMHIFALYLVELVGRDGALVASHMEKPSGQSGTQNLTRSQIELESIDNKFEALREAYDAIRVETLNVVSEYATIHEDIYNLVNEKHTSLILLPFHKQLSPEGAFETTDVAFKDINLNVMQSAPCSVGLFVDRNLGSLPKMNFRICMIFVGGPDDREALSVAWRMTGHLGTQLLVVRMLLFGKAAIVDTTSHDKARGILSIVMDSEKQKELDDEYVNGFRLTTMNNNDSISYSEVDVHSAEDIPTSLNEIEKIGCDLYIVGQGNRRNTRVFLNLLEWCDCPELGVLGDILASNNFGSGSSVLVVQQYGYGGMVLGKQPNQVNDNNDAFEVL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2283 721 Pfam Sodium/hydrogen exchanger family 2 335 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g2283 721 PANTHER CATION/H + ANTIPORTER 1 710 - -
Mtr5g2283 721 PANTHER CATION/H+ EXCHANGER 3 1 710 - -
Mtr5g2283 721 Coils Coil 427 454 - -
Mtr5g2283 721 Gene3D - 2 350 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2283 Mtr-Chr5 29953024 29955292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2283 4 697 Antiporter Super Family AT2G13620 35.704 7.15e-160 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2283 - - gmx:100804266 1039.64