Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2282 ATGGAAGAGGTCATGAATTTCATCATGCGTGCTTTTGAATTAGCAAAAAATCTTGAACTAGAACTACCTAACATAACCAACCACCCTGAAATGCTATTCTCATCCATTGATGAAGTAGAAAAAGCATTTAATGCTGCCAAAGAAAGAGTAATGATGATGTTGTCCTCACAACATGACACAACAACAACAACAAAACCTTCTAATTCCTTTGCTCAAATTCCGTCTCATGATGTTTTCATGCAAAAAACTCAACATGCTCAAATTGGTGGAAGTGGAAGTGCAATTTCAATGCATGCACATTCAATGGATCAATTGCTTCTAATTCAACACCCTTTTGATGTGAGTGTTCTACTTGAGAATAAGATGATAAGTGGTGGTGGTGATGTTCACTTGTTAAGGTCTAGAGGAACTTTGAGGATTGGTGAAATGGGTGGTGGGAGGGATGTGGAAGGTTTAGATAGATCAAAAGGGATAGAAGGAGATCAAATGCAAGGAATAGAAACACCACCTTCAAGACCAAAAAAATGCAGCAGGAAGAATGATTTGGAGAAGAGAACAGAGATGTATCCAGCACCTCAGATTGGAAACACTGAAATGCCACCAGAAGATGGCTTTACTTGGAGAAAATATGGCCAAAAAGAAATACTTGGCCGCAAGCACCCAAGAAGTTACTATAGGTGCACACACCAAAAATTATATTTGTGTCCAGCCAAGAAGCAAGTGCAAAGACTTGATGAAAACCCTAACATAGTTGAAGTAACATATAGAGGTGAACACATTTGTCACAAATCCTTAACAGCACCATCATCATATCCACCACCACCAAACCTACTTGTCAACATTAGTACCATTGAGACTGCCATTTCTTCCCAAGGGTGGCCACCTGTGGTGAACCACGACCTCAGGGACGGAGACGGTAGTGGTGGACCCTCTAATTCAAGATTCGGCATTGATTATCCGGTGGCCGATATGGCGGATGTAATGTTCAACTCGGGTAGTAGCAGTGGCAATAGTATGGAATCACTCTTTTATATAACTGAAGATAAAGGTGAACCTGATGAGGAGAAACACTGA 1074 0.4069 MEEVMNFIMRAFELAKNLELELPNITNHPEMLFSSIDEVEKAFNAAKERVMMMLSSQHDTTTTTKPSNSFAQIPSHDVFMQKTQHAQIGGSGSAISMHAHSMDQLLLIQHPFDVSVLLENKMISGGGDVHLLRSRGTLRIGEMGGGRDVEGLDRSKGIEGDQMQGIETPPSRPKKCSRKNDLEKRTEMYPAPQIGNTEMPPEDGFTWRKYGQKEILGRKHPRSYYRCTHQKLYLCPAKKQVQRLDENPNIVEVTYRGEHICHKSLTAPSSYPPPPNLLVNISTIETAISSQGWPPVVNHDLRDGDGSGGPSNSRFGIDYPVADMADVMFNSGSSSGNSMESLFYITEDKGEPDEEKH* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2282 357 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 273 IPR044810 GO:0003700
Mtr5g2282 357 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 273 - -
Mtr5g2282 357 MobiDBLite consensus disorder prediction 160 181 - -
Mtr5g2282 357 SUPERFAMILY WRKY DNA-binding domain 198 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g2282 357 Gene3D WRKY domain 191 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g2282 357 ProSiteProfiles WRKY domain profile. 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2282 357 SMART WRKY_cls 201 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g2282 357 Pfam WRKY DNA -binding domain 202 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2282 Mtr-Chr5 29944529 29949426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2282 1 343 WRKY Transcription Factor Family AT2G40740 35.043 5.70e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr5g2282 WRKY 6.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2282 - - mtr:MTR_5g067680 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2282 5 29944529 29949426 Mtr5g2282 5 29944529 29949426 ECH