Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2263 ATGGAGCATCAATGCTTCAATTCCCATCCCAATTCCGGCAATTCCTCACCCACCTCTCGTGAATTGCTCGAAAACGATCACCACCACCGTTCATTCGATGAACCACCACCTTCCAACGGTCCAAGAGTTAAGCTCATGATTCGCTTCGGCGGAAAAATTGATCTCAGGCTTCACGACGATCAAAACTATTCCTACATCGGCGGTGACACCAAAATCCTCACCGTCGATCGTAGTATCAAATTCTCTAGCCTCATTGAGAAGCTATCATCAATGACGTTTTCTGATCTTTGCCTAAAGTATCAACAACCTGGTGGAGAGCTCGATTCTTTGATCTCAGTATTCAACGATGACGATCTCGATAGTATGATGTTTGAGTATGATTGCATGTGTCGCGTTTCACCTAAACCTGCAAGGATGAAGGTTTTTCTCTTCCCTCTCCCAGTTAACAATGCATCTTCTGATTCTTTGGATTCCGCTTTCAATCTTGCGGTGGTGGAAGATTCGAAATCCGACGGACAAATGTTCGTCAACATGCTCAATTCCGTTCATCGTCCACCGCCGGTGGAAGATTTATCCCCTCCACCGCCGTTGACGATGAAGACGAGTCCAGATTATCTGTTTGGATTAGATGACAATCAGGCAAAAATTCCGGTGACTGAACCGGATTTCGCGGCAAAGGATACGGAGTGTGGGACCGAGACGGTAACAGAAAAAGAGATTCAGGAAATTCAGATGGTGGAAACTGTGAATGATGATGAAAAGAAAGTGAAAGTTAACGGAGAAAACGACGGAATTAACGGTAATGCTGAACAGCAAGTGAAATTTGACGGAGAAAACGGTGGAAATAACGGTGGTGTTGATGTTTCCTCTGAAGAAAACGCGGAAAGAGTGATTCCGTTAGTTACTAGTGAACCTTCTGCTGAGGATCCGGTTCAAGAAGTTCAACCCGGTTCATATTGTTCCTGTTCGGTTCAGGTACCTGAACCGGTTTCGGTTCAGTCATCCTTTGCTTCAGAAATGTATAATGTTGCTGTTGCTGGTGCTGGTTATTCGATGGGGTATGTAAATGAACCGTTACCGGTTTATTTGATTCCAACACCTTCTGGATTGTATCAAGCTATGAGGCCGATTACTGGACCAACTGGTCAACCGGTTTATTTTGCGTATTCGCCGATTGTAAACAATGGTGGTGGATATTCGCATGGTTCTTATGTGGCTAACAGATCAGCTTTGCCCTTGTAG 1242 0.4477 MEHQCFNSHPNSGNSSPTSRELLENDHHHRSFDEPPPSNGPRVKLMIRFGGKIDLRLHDDQNYSYIGGDTKILTVDRSIKFSSLIEKLSSMTFSDLCLKYQQPGGELDSLISVFNDDDLDSMMFEYDCMCRVSPKPARMKVFLFPLPVNNASSDSLDSAFNLAVVEDSKSDGQMFVNMLNSVHRPPPVEDLSPPPPLTMKTSPDYLFGLDDNQAKIPVTEPDFAAKDTECGTETVTEKEIQEIQMVETVNDDEKKVKVNGENDGINGNAEQQVKFDGENGGNNGGVDVSSEENAERVIPLVTSEPSAEDPVQEVQPGSYCSCSVQVPEPVSVQSSFASEMYNVAVAGAGYSMGYVNEPLPVYLIPTPSGLYQAMRPITGPTGQPVYFAYSPIVNNGGGYSHGSYVANRSALPL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2263 413 Pfam PB1 domain 63 145 IPR000270 GO:0005515
Mtr5g2263 413 CDD PB1_UP2 46 144 - -
Mtr5g2263 413 SMART PB1_new 52 146 IPR000270 GO:0005515
Mtr5g2263 413 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g2263 413 SUPERFAMILY CAD & PB1 domains 60 150 - -
Mtr5g2263 413 MobiDBLite consensus disorder prediction 1 21 - -
Mtr5g2263 413 Gene3D - 64 144 - -
Mtr5g2263 413 PANTHER OS05G0427100 PROTEIN-RELATED 1 389 - -
Mtr5g2263 413 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2263 Mtr-Chr5 29727639 29728880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2263 42 182 MAP Kinase Kinase Kinase AT5G57610 34.043 9.86e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2263 - - cam:101512371 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2263 5 29727639 29728880 Mtr5g2263 5 29727639 29728880 ECH