Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2245 ATGCCTCACAGAGCAACTTACTTTTTTCCTAGGCAATTTCCAGAGAAAAGGTTCGATGAATCTTCAAAGAGTAGTACATTAGATCACGAGAAGAAAAAATCTCCAGTCAAATCTACGGATACGACTTTTTGCACTGAAAACGACGTGCCGAAAAGTTCAAACACTCCTACCAAAGTCAATCTCGCAAAAAACTCTGCGGTTTCGGAACTTGGTAAAAAGTTTCGAAATGAACAGAAGCAAATTGCAGCGTTTTGTGATTGGTTGGTTGATAAAAGACACAGCCATCATCACCGCCGTCATCGTCATCATCAACACCAGCATCATCATCAGCGTCACCGATCAGATCATATTCTACATGAAGAGGACGAGGAGGATCGTGAGCTTCTGCTTCCGGATTCAGAGAAGGTGTCTTCGCCTGATAAGGATGTTGTTGATGTTGATAGAAGGTTTGAAAGGGAGGCTTCGTTATCTAGATTGTCGAGTGGAAGCAGTTACGCGACGAGTTTGTTTGCTTCAGATGTTACCGTTACTGCTACATTCTCAAGTGATGATATTACAAAAGAAGATACGTCGTCGTTTCGAGTTTCTACTAATGAAGTTACAAGAAGGAACAAACAGGAAGAAGAAGAGGAACATCATGAAGAAGAAAAACTCAACGATCAGAAGAACTACGCTAAGGAGTGTAAAGAAAGCTATGAACTACAAACAGCGTTGGCGAAGAGGCTTTCTTTCTTATCAACCTTTGGTTCAGAACCGGTTCTCACTTTTGATACTGGATTGGAAACCTGGGATGTTGAATCAGTTTCTCGTCGTTTATGGGTGACAGGGTGTTTGTCGTACACTGACAAGATTGCGGATGGATTTTATAACATATTGGGAATGAATCCGTATTTGTGGGTTATGTGTAATGACATGGAGGAAGAAGGGAATTTCCTTCCTACATTGATGGCGCTTAAAGCGGTTGAACCCAATGAGAGTTCTTTGGAAGTGATTCTTATTGATAGACGCGAGGATTCTCGTCTACAAGTACTTCAAGATAAAGCTCAAGAGTTGTATTCTGCTTCTGAGAATGCCTTGGTGCTCGTTGAAAAGCTTGGAAAACTTGTTGCTATCTTTATGGGGGGTTCCTTCCCTGTGGAGCAAGGAGATCTGCAAAAAAGGTGGAAGATGGTTAGTAAGCGGTTGAGGAATTTTCATCAGTGTGTTGTGCTTCCAGTTGGTAATTTGTCCACGGGACTCTGTAGGCATCGCGCAATTCTCTTCAAGAGATTGGCGGATTATATAGGTTTGCCATGCCGCATTGCTCGAGGTTGCCGGTACTGTGCTTCGGATCATCAATCCTCTATTCTTGTGAAGATCAAAGATGACAGGCAACTGTCAAGGGAGTATGTTGTGGACCTTGTTGGGGAACCGGGAAATATTACCGGGCCAGATTCCTCAATTAATGGAGCATATGTGTCTTCAACACCTTCTCCATTTCAAATTTCTCATTTGAGAAAATCTCAATCGCCCTACGTGGATGATGCAGCATCTCCTCAAGTTATATGTTTTAATCAGAGTTCTTCTAACAATCAACCGTATTCAGGTCGCGTACAGATAGATCAACCAAATAAAGAAACTGATTTCCTCAAAACTAACAATGACTTGATTTATGCTTCAGTTGATAAAACTTCTGGAGGTGTTTCTGAAGCTCTTCGCCCAGCCTCTGAAGCATTATTACATGACATTCCATTTGTTGGTAAAGATTCAGTTGTAGTCCAAGAAATTTCTTACAATGAGATCATTGCAAAGGGATGTTCAGTGGTAACTGGTATCCAGTCAAAGCAGGAACAAGTAGAAAATCGACTTTATAACCAGGGTGCTGGGGATATTCCAAAATATGTGAATCTTGAACCATCACTAGCAATGGACTGGCTTGAGATATCATGGGATGAGCTGCGGATCAAAGAACGCATTGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCAGATGTTGCCGTCAAAGTTTTATCAGTTCAAAATTTCCATGACGATCAGTTGAAAGAGTTTTTACGAGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTGCTTTTCATGGGTGCGGTTACAAAACGTCCTCATCTATCTATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATTCCGCCTGATTCACAGGCCGGCATCCAGTGAAATGCACGATCCAAGGAGAAGATTACGAATGGCTCTAGACGTGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCTATCGTGCACTGGGATCTCAAATCTCCAAACCTGTTAGTAGACAAAAATTGGAATGTGAAGGTGTGTGATTTTGGGTTGTCCAGATTTAAGGCAAATACTTTCTTGTCATCAAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCAGAGTTTCTTCGTGGAGAACCTACAAACGAGAAGTCTGATGTTTACAGTTTTGGTGTCATCCTGTGGGAACTAGTGACCTTACAACAACCATGGAATGGACTTAGCCATGCCCAGGTGGTTGGAGCCGTCGCATTTCAGAATAGGAGACCTTCTATCCCTCCAAACGTCTCCCCAGTATTGGCCTCCCTTATGGAATCCTGTTGGGCTGATAACCCTGCTGATCGCCCATCTTTTGCCAGCATAGTTGAGACCATAAAGAAGCTGCTGAAGTCACCAGCGGATGCGATAAAAATGGGTGGAACGTAA 2745 0.4284 MPHRATYFFPRQFPEKRFDESSKSSTLDHEKKKSPVKSTDTTFCTENDVPKSSNTPTKVNLAKNSAVSELGKKFRNEQKQIAAFCDWLVDKRHSHHHRRHRHHQHQHHHQRHRSDHILHEEDEEDRELLLPDSEKVSSPDKDVVDVDRRFEREASLSRLSSGSSYATSLFASDVTVTATFSSDDITKEDTSSFRVSTNEVTRRNKQEEEEEHHEEEKLNDQKNYAKECKESYELQTALAKRLSFLSTFGSEPVLTFDTGLETWDVESVSRRLWVTGCLSYTDKIADGFYNILGMNPYLWVMCNDMEEEGNFLPTLMALKAVEPNESSLEVILIDRREDSRLQVLQDKAQELYSASENALVLVEKLGKLVAIFMGGSFPVEQGDLQKRWKMVSKRLRNFHQCVVLPVGNLSTGLCRHRAILFKRLADYIGLPCRIARGCRYCASDHQSSILVKIKDDRQLSREYVVDLVGEPGNITGPDSSINGAYVSSTPSPFQISHLRKSQSPYVDDAASPQVICFNQSSSNNQPYSGRVQIDQPNKETDFLKTNNDLIYASVDKTSGGVSEALRPASEALLHDIPFVGKDSVVVQEISYNEIIAKGCSVVTGIQSKQEQVENRLYNQGAGDIPKYVNLEPSLAMDWLEISWDELRIKERIGSFGTVYRAEWHGSDVAVKVLSVQNFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPASSEMHDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPTNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRPSIPPNVSPVLASLMESCWADNPADRPSFASIVETIKKLLKSPADAIKMGGT* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2245 914 Gene3D Transferase(Phosphotransferase) domain 1 723 910 - -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 96 115 - -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 96 113 - -
Mtr5g2245 914 Pfam Ethylene-responsive protein kinase Le-CTR1 265 474 - -
Mtr5g2245 914 PRINTS Tyrosine kinase catalytic domain signature 718 731 IPR001245 GO:0004672|GO:0006468
Mtr5g2245 914 PRINTS Tyrosine kinase catalytic domain signature 759 777 IPR001245 GO:0004672|GO:0006468
Mtr5g2245 914 PRINTS Tyrosine kinase catalytic domain signature 825 847 IPR001245 GO:0004672|GO:0006468
Mtr5g2245 914 PRINTS Tyrosine kinase catalytic domain signature 869 891 IPR001245 GO:0004672|GO:0006468
Mtr5g2245 914 SUPERFAMILY Protein kinase-like (PK-like) 625 896 IPR011009 -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 122 144 - -
Mtr5g2245 914 Coils Coil 198 223 - -
Mtr5g2245 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Mtr5g2245 914 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 138 912 - -
Mtr5g2245 914 CDD STKc_MAP3K-like 653 896 - -
Mtr5g2245 914 Pfam Protein tyrosine and serine/threonine kinase 653 897 IPR001245 GO:0004672|GO:0006468
Mtr5g2245 914 MobiDBLite consensus disorder prediction 200 222 - -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 191 222 - -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 17 57 - -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 17 37 - -
Mtr5g2245 914 ProSiteProfiles Protein kinase domain profile. 644 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2245 914 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 912 - -
Mtr5g2245 914 SMART serkin_6 646 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2245 914 Gene3D Phosphorylase Kinase; domain 1 639 721 - -
Mtr5g2245 914 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2245 Mtr-Chr5 29390938 29398976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2245 1 913 MAP Kinase Kinase Kinase AT4G24480 55.370 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr5g2245 PK_Tyr_Ser-Thr 2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2245 - - gmx:100786546 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2245 5 29390938 29398976 Mtr5g2245 5 29390938 29398976 ECH
Mtr5g2245 5 29390938 29398976 Mtr3g3556 3 49426431 49434349 PCT