Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2232 ATGATGAACGCAACTCGAGCAGAAGCTGAACGGTTACTAGGAATCTCCGAAAAGCTTCTCCAAAACCGAGATCTAATGGGTTCCAAAGAATTCGCAATCCTAGCACAAGAAACCGAACCCCTTCTTGAAGGTTCCGATCAGATCTTAGCAATCATCGACGTTCTCATCGCTTCCGAAAAGCGCGTCAACAACAACCCTGATTGGTACTCCATCCTCCAAATCGATCGCCGATCCGACGACCTCGACCTTATCAAGAAACAATACCGCCGTCTCGCTCTTCTCCTTCATCCCGACAAAAGCCGCTTTCATTTCGCCGATCATGCTTTCAAGCTCGTTGCTGATGCTTGGGCTGTTCTCTCCGATCCGGTAAAGAAATCTCATTATGATAAAGATCTATCTTTTTTCGCTCGGGTTGATTTATCGGTTCCTGGTTGGGTTCAGCAAGATAAGTTACCGGTTCGTAGAACCGGGCCTGGGCCTGTTAATGGGCCCGGTCCACGGAACAGTGCGGCGTCTGCTAGAGAGGAGGTAGCTGCGGATGTTCGGAGAAATGCGACTTTTTGGACGACGTGTCCTTATTGTTACCGTTTGTATGAGTTTCCAAAGGCTTATGAGGGGTTTTGTTTGAGATGTCCTAATTCTAGTTGTGATAAATCATTTCATGGTGTTAATGTTCCGTCTTTGCCGCCGTTAGTTCCGGGGCAAGAGGCTTATTATTGTTGTTGGGGTTTTTTTCCTATGGGGTTTGTGGTTGGAAATGATGGTGCTGAGGAGAAACGGGCTGAGCCGGAGCTGGCGCCGGAGATTGTGGTGGAGCCGGAAGAACCTGCTCCTGTGCCAATATCGGTTCAAGGTGTGTCTGGGTCTTCGCTTCCGAATTGGATGCCAGCGCCTGTGCCGGTGGAGAATGGTGGGAATAATGTAGTGTCGGTGACGGCTACTGTTACTACACCGGTGAGGGTGACTACGAGGTCAGGTGCTGTTACTGGTGGTGTTTCAAATGGTGTTGCTTCTGGTCCGAAGAAGCGTGGAAGGCCGAGGAAGTATTATTAA 1053 0.4938 MMNATRAEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIIDVLIASEKRVNNNPDWYSILQIDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPVKKSHYDKDLSFFARVDLSVPGWVQQDKLPVRRTGPGPVNGPGPRNSAASAREEVAADVRRNATFWTTCPYCYRLYEFPKAYEGFCLRCPNSSCDKSFHGVNVPSLPPLVPGQEAYYCCWGFFPMGFVVGNDGAEEKRAEPELAPEIVVEPEEPAPVPISVQGVSGSSLPNWMPAPVPVENGGNNVVSVTATVTTPVRVTTRSGAVTGGVSNGVASGPKKRGRPRKYY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2232 350 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 348 - -
Mtr5g2232 350 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Mtr5g2232 350 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Mtr5g2232 350 MobiDBLite consensus disorder prediction 326 350 - -
Mtr5g2232 350 Gene3D DnaJ domain 55 138 IPR036869 -
Mtr5g2232 350 SMART dnaj_3 66 124 IPR001623 -
Mtr5g2232 350 Pfam DnaJ domain 67 129 IPR001623 -
Mtr5g2232 350 CDD DnaJ 67 121 IPR001623 -
Mtr5g2232 350 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Mtr5g2232 350 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 348 - -
Mtr5g2232 350 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mtr5g2232 350 PRINTS DnaJ domain signature 88 103 IPR001623 -
Mtr5g2232 350 PRINTS DnaJ domain signature 104 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2232 Mtr-Chr5 29205770 29207441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2232 3 347 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.067 1.88e-98 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2232 - - gmx:100816918 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2232 5 29205770 29207441 Mtr5g2232 5 29205770 29207441 ECH
Mtr5g2232 5 29205770 29207441 Mtr3g3573 3 49585987 49586978 PCT