Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g2227 | ATGTTCTCAAACTTTCAACAACAACAACATCATAACCTATTTCAACCTTCACGTGAATGCCAAACCTCAGAAGAAGATGAAACCCGAAGCAGCGGTGGGCCCAGCCCAAACAAACCTTCCTGTAACGACGGCGCCACCATTGAAATTGGTCGTAGGCCAAGAGGCCGTCCACCTGGCTCCAAAAACAAGCCTAAAGCCCAATCACAAATCATAATCAATCACTCCTCCGACCCTGCCATGAGCCCACACATTCTCGAAATCCCAGAAGGCAGCGACGTCGTTGAAGCAATATCCCGGTTCAGTAACAGAAGAAAAACCGGTTTATGTGTATTAACCGGTTCAGGCACTGTAGCTAACGTTACACTCCGTCAACCTTCTGGTCCTCCTGGCACCACCGTTACTTTTCACGGTCGTTTCAACATTCTTTCAATCTCCGCCACGTTCTTCTCTCCGTTAGAATCCTCACCACCCATGAACAAAGAATTCTCAATCTCACTCGCCGCACCTCAGGGTCAGATCGTTGGAGGGTTTGTCGTCGGTCCGTTGCTTGCCGCCGGTACGGTGTTTGTCATTGCTGCTTCCTTTAACAATCCTTCTTATCATAGATTACCTTTGGAAGAGGATGTGAGGAATAACTCAGTCTCCGGCGGCTATGAAGAGAAGTCGCCGCCGCAGCTTTCTGGTGGAGAGTCGTGTATGTATAGCTCTCAGCTTCCTTCTGATGTGATTTGGGCTCCAACGGCAAGAACAAATTTCTGA | 759 | 0.4875 | MFSNFQQQQHHNLFQPSRECQTSEEDETRSSGGPSPNKPSCNDGATIEIGRRPRGRPPGSKNKPKAQSQIIINHSSDPAMSPHILEIPEGSDVVEAISRFSNRRKTGLCVLTGSGTVANVTLRQPSGPPGTTVTFHGRFNILSISATFFSPLESSPPMNKEFSISLAAPQGQIVGGFVVGPLLAAGTVFVIAASFNNPSYHRLPLEEDVRNNSVSGGYEEKSPPQLSGGESCMYSSQLPSDVIWAPTARTNF* | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g2227 | 252 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Mtr5g2227 | 252 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Mtr5g2227 | 252 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 6 | 249 | IPR014476 | GO:0003680 | |
Mtr5g2227 | 252 | Gene3D | - | 81 | 215 | - | - | |
Mtr5g2227 | 252 | ProSiteProfiles | PPC domain profile profile. | 77 | 216 | IPR005175 | - | |
Mtr5g2227 | 252 | MobiDBLite | consensus disorder prediction | 212 | 232 | - | - | |
Mtr5g2227 | 252 | CDD | DUF296 | 82 | 195 | IPR005175 | - | |
Mtr5g2227 | 252 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 79 | 207 | - | - | |
Mtr5g2227 | 252 | MobiDBLite | consensus disorder prediction | 27 | 42 | - | - | |
Mtr5g2227 | 252 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED | 6 | 249 | - | - | |
Mtr5g2227 | 252 | PIRSF | ESCAROLA | 1 | 244 | IPR014476 | GO:0003680 | |
Mtr5g2227 | 252 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 82 | 197 | IPR005175 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g2227 | Mtr-Chr5 | 29159596 | 29160867 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g2227 | 43 | 249 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G49700 | 58.850 | 1.66e-83 | 249 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g2227 | - | - | cam:101500910 | 368.622 |