Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2217 ATGGGAGAAAATTGTGGAACCTGGACGCCTCAGGTGCAATTTAATTTGCAATCACCCAATTTAAGTTCCTATTGTGCTCCCTCTGAGACAAGGAAGCCTGCTTTTGCAGCTATGAACCCGGGTATCAATATGAATATGATACCGAGGAATGAGGCAGCACCAGCTTATGGATCCTCTGCATCACCTCATGTGCAGTTAGGAAATTCTAATGAACCTCACGGTTGGTTTTATTGTTTGCCTCGATTTCGACAGGGTTTTACGAGTCCTCCAAACTTCACTTCGGAGGAGAAACTCCCTCCCGCTAGTCATTTGAAGGGTTTTAAGGAGGACATTGCACCCAATGGGGAATCGGGGTTCCCTCAGAAACAGTTTTTGGTCGTTGATCAAACGGGTGATCAAACAACTGTTATTTATAGTTCAAGATTTGGGAGCCCTGTTGAGTGTCTTGGTTCCTGGGATTCGAAATTGAATGGTTGTAGCAATTTAAATGGGAATGATGAACCCTCCTTAAGGAGAGATGTGAATCATGTGATTGAAGTTGGACCAACTTTTGATTATAAAGTTGATGAAAATGATAATCAAGGAACTGAGATTGAAAGTGAGATGCACGAAGATACAGAGGAAATCAATGCATTGCTTTACTCAGACAGTGATGGTTATTCTACTGAGGATGATGAAGTTACCAGCACAGGGCATTCACCCAGTACAATGACCACTCATGTCAACCAACAACCTTTCAGAATTGGAGGAACCGCAGAAGAAGTTGCTAGCTCCTCCCCTGGTAAAACAAAGAAACGTAAGCTATTCAATATGGCTTATAGTGATGTTGATGTGCAGTTTATGGACACTGCAAGCTCTCTAAAACGAAACAGACCCTTTGATCTCAACCGCGGTGTTGATGATGATGACGACGCAGAATCAAGGTGCTCGGGTAGCAATTACGGCAGAGGGTCACCTGAAATTGGTTCCTTAACAGGCCATAAGAAGATGAGAAAGGAAAAGATTCAGAATGTTCTAAGCATTCTGCAATGCATAGTTCCAAATGGTAAGGACAAGGAACCAATTCAGCTTCTGGATGAGGCCATACATTGCTTGAATTCTTTGAAACTCAAGGCTAGAGCTCTTGGACTCAATGCCTTGTAA 1143 0.4287 MGENCGTWTPQVQFNLQSPNLSSYCAPSETRKPAFAAMNPGINMNMIPRNEAAPAYGSSASPHVQLGNSNEPHGWFYCLPRFRQGFTSPPNFTSEEKLPPASHLKGFKEDIAPNGESGFPQKQFLVVDQTGDQTTVIYSSRFGSPVECLGSWDSKLNGCSNLNGNDEPSLRRDVNHVIEVGPTFDYKVDENDNQGTEIESEMHEDTEEINALLYSDSDGYSTEDDEVTSTGHSPSTMTTHVNQQPFRIGGTAEEVASSSPGKTKKRKLFNMAYSDVDVQFMDTASSLKRNRPFDLNRGVDDDDDAESRCSGSNYGRGSPEIGSLTGHKKMRKEKIQNVLSILQCIVPNGKDKEPIQLLDEAIHCLNSLKLKARALGLNAL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2217 380 MobiDBLite consensus disorder prediction 294 324 - -
Mtr5g2217 380 MobiDBLite consensus disorder prediction 217 241 - -
Mtr5g2217 380 MobiDBLite consensus disorder prediction 294 309 - -
Mtr5g2217 380 MobiDBLite consensus disorder prediction 224 241 - -
Mtr5g2217 380 PANTHER TRANSCRIPTION FACTOR BHLH145 1 378 IPR037546 -
Mtr5g2217 380 PANTHER TRANSCRIPTION FACTOR BHLH145 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2217 Mtr-Chr5 28971175 28974845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2217 112 369 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 35.606 2.26e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2217 - - mtr:MTR_5g065670 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2217 5 28971175 28974845 Mtr5g2217 5 28971175 28974845 ECH