Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2205 ATGAGAAGGTTCACGTTGTTATCGCCGTATCGGCGCCATTTTCTTTCTTCCATTGCATCACAACCTCTCGTTCATGAAATTGATTCGTTCCGGAAATTATTCTCATCTCATCAATCGTTGTTGCTTTCACGAAGTTTGTTCGGTTGCAGTTTTGATACGAAAAAAGAGGATTATCTAATTCCAGGAATTCCATTCAGATATCGTTATGTTTATGCTACAGCAGCATATTCTTCTTCAGCTGAACGAAACTATTATCAGATACTTGGTGTTGGTGAAAATGCTAGTCAGGATGAGATAAAGAAGGCATTTCACTCGCTTGCTAAAAAGTACCATCCAGATGCAAATAAGAGTAATCCATCAGCAAAGAGGAAATTTCAAGATGTAAGAGAAGCTTATGAGACATTAAGAGACTCTAAAAAGAGGGCCGAGTATGACAAGATGCGTGCTCACGGTTCAGAGAATATGGGATATGGTAACAATTACGATGATGCAGAAAGATTTAGAAAGGCCTATCGTTCTCATTTTTCTGATTCATTTCATCAAGTATTCTCTGAGATATTTGAAGAAGCAACAACTCAGTTCTCATCAAATATAGAGGTGGAGCTATCACTTACCTTCTCGGAAGCCGCGAGAGGATGCACCAAAAATGTGTCATTTGATGCAGCAGTTCCCTGTGATAATTGTGATGGACGGGGACATCCACAAAATGCTACCCGAACAGTTTGTCCATCATGCAGGGGTGCCGGTCGAGTTACAATCCCACCATTTACATCAACATGCATTACTTGTAAAGGATCTGGCCGCATTATTAAGGAGTTTTGTTTGTCTTGTGGAGGATCTGGGGTTATTGAAGGGATTAAAGAGGTTAAAGTTACCATACCAGCAGGTGTGGATTCAGGAGATACAATCCATGTGCCAGAAGGTGGGAATGCTGCTGGAAGTGGTGGTCGACATGGGAGTTTATACATTAAAATAAAGGTGGATGAGGATCCAGTCTTTTCGAGGGATGGTGCAGATATCTACGTGGAATCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCAAAGTTGAGGTGCCTACTTTATCAGGGAAGATGCAAGTAAAGATACCTAAGGGTGTTCAACCAGGACAGCTGCAAGTATTTAGAGGCAAAGGACTGCCAAAGCATGGGTATTTTGTACATCATGGCAATCAGTATGTGCGTTTCCGTGTAAAGTTTCCCACTGCAATCAATGAACGACAACGTGCTATACTTGAAGAATTTGCAAAGGAGGAAATAAAGGAGGGAAATAGTTCAATATCTGAAGGAAATTGGCTTTACCAGCAGCTGTCTACTGGTTGA 1344 0.4115 MRRFTLLSPYRRHFLSSIASQPLVHEIDSFRKLFSSHQSLLLSRSLFGCSFDTKKEDYLIPGIPFRYRYVYATAAYSSSAERNYYQILGVGENASQDEIKKAFHSLAKKYHPDANKSNPSAKRKFQDVREAYETLRDSKKRAEYDKMRAHGSENMGYGNNYDDAERFRKAYRSHFSDSFHQVFSEIFEEATTQFSSNIEVELSLTFSEAARGCTKNVSFDAAVPCDNCDGRGHPQNATRTVCPSCRGAGRVTIPPFTSTCITCKGSGRIIKEFCLSCGGSGVIEGIKEVKVTIPAGVDSGDTIHVPEGGNAAGSGGRHGSLYIKIKVDEDPVFSRDGADIYVESNISFTQAILGGKVEVPTLSGKMQVKIPKGVQPGQLQVFRGKGLPKHGYFVHHGNQYVRFRVKFPTAINERQRAILEEFAKEEIKEGNSSISEGNWLYQQLSTG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2205 447 Gene3D - 196 326 - -
Mtr5g2205 447 Gene3D DnaJ domain 79 195 IPR036869 -
Mtr5g2205 447 Hamap Chaperone protein DnaJ [dnaJ]. 80 430 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mtr5g2205 447 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 419 IPR008971 GO:0006457|GO:0051082
Mtr5g2205 447 Gene3D - 329 436 - -
Mtr5g2205 447 Pfam DnaJ domain 83 145 IPR001623 -
Mtr5g2205 447 SUPERFAMILY Chaperone J-domain 79 172 IPR036869 -
Mtr5g2205 447 PRINTS DnaJ domain signature 85 103 IPR001623 -
Mtr5g2205 447 PRINTS DnaJ domain signature 103 118 IPR001623 -
Mtr5g2205 447 PRINTS DnaJ domain signature 120 140 IPR001623 -
Mtr5g2205 447 PRINTS DnaJ domain signature 140 159 IPR001623 -
Mtr5g2205 447 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Mtr5g2205 447 SMART dnaj_3 82 140 IPR001623 -
Mtr5g2205 447 Pfam DnaJ C terminal domain 198 408 IPR002939 -
Mtr5g2205 447 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Mtr5g2205 447 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 441 - -
Mtr5g2205 447 Gene3D - 255 288 - -
Mtr5g2205 447 Gene3D - 220 254 - -
Mtr5g2205 447 SUPERFAMILY HSP40/DnaJ peptide-binding domain 197 328 IPR008971 GO:0006457|GO:0051082
Mtr5g2205 447 CDD DnaJ_C 196 409 - -
Mtr5g2205 447 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 212 283 IPR036410 -
Mtr5g2205 447 ProSiteProfiles Zinc finger CR-type profile. 212 286 IPR001305 GO:0031072|GO:0051082
Mtr5g2205 447 PANTHER CHAPERONE PROTEIN DNAJ 1, MITOCHONDRIAL 32 441 - -
Mtr5g2205 447 CDD DnaJ 83 137 IPR001623 -
Mtr5g2205 447 CDD DnaJ_zf 225 281 IPR001305 GO:0031072|GO:0051082
Mtr5g2205 447 Pfam DnaJ central domain 225 281 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2205 Mtr-Chr5 28721775 28733689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2205 74 150 C2H2 Transcription Factor Family AT1G74250 39.024 1.10e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2205 5 28721775 28733689 Mtr5g2205 5 28721775 28733689 ECH