Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2204 ATGGCTCTGTATCCCTTTGTTTGTTGTCTTATTGTCATAATTGTATCCCAAGCCAAAGCCATATTTGAATGTGATAATAACAGAGGAAACTACACAGTCAATAGCACCTACGACAACAACCTTAAAACCCTTCTATACAGTTTCTCTTCCCACACAGAAATTAACTACGGTTTTTACAATTTCTCATATGGCCAACACCCAGACAAAATAAAGGCCATTGGGTTGTGTCGCGGAGATCTTGAGCCAAATCAGTGTCGTAGAAACCTAAACAATTCCATTGCCTATCTTAGAGCAAAGTGTCCAAATCAAAAAGAGGCCATTTTGTGGGGTGATGATGTCACTTTAAGGTACACATATCGTTCAATACTTGGGAGCTTGGAAACTGATCCTACACGATATTTTAGTAATACAATGTCTACAACTGAAGCGGACAAGTACATTGAACCACTTAGTTTTGTGATGAGAAATCTAACAGACAAAGCTGCATCTGGCGACTCTCGTCGCAAATATGAGGCAGATGGTGTGAATACTACAGATTTTAGCACCATATACGGTCTTGTTCAATGCATGCCTGATTTGTCTTCGCAACAATGCTCTAACTGCTTATATACGGCTATCTCAGAAATTGATCCTGATCCATTCAATAGATATTATATGGGATTAGGAGGAGAAGTTGTTAAACCAAGTTGTCGCTTAAGATTTGATACTTATCGCTTCTACAATTCAACAATTGAGTTAGAGTCACTGTCGCTACAACCTTCACCGTCTCTACCACCTTCGGCAGTCACCAATAATACCTCTTTAGGACACAGCAAAATAGGAATTGTCATCGCCACCACAGTGCCCGTTGTTACTGTGGTTTTGGTACTCATTTTTATTTGCTTCTATAGATTGAGAAAGCCAAAACTAAATTTTGAAGCCAATATGGGAAAATATGATGATGGAGGTGAAGAGGATATGACGATCGTTGAGTCATTGCAATTTAACTTTGATATCATACAAGTTGCTACGAGTGATTTCTCTAATTCTAATAAACTTGGACAAGGTGGATTTGGAATTGTTTATCGGGGTAAACTGCTTAATGGGCATATGATTGCTGTGAAAAGGTTGTCAACAAATTCTGACCAAGGAGATGTTGAGTTTAAAAATGAAGTACTTTTAGTAGCCAAACTTCAACATCGAAATCTAGTTAGGCTACTTGGTTTCTGTCTAGAAGGGAGAGAAAGACTACTTATTTATGAATTTGTTTCAAATAAAAGTCTTGATTACTTCATATTTGATCCGACAAGGAAAACACAATTGAATTGGCAAACGCGCTACAATATCATAAAAGGTATTGCTCGAGGTCTTCTTTATCTTCACGAGGATTCTCGCTTGCGCATTATACACCGTGATCTCAAAGCAAGCAATATTCTTTTAGACGAAGAGATGAATCCTAAGATATCCGATTTTGGATTGGCAAGACGATTTGTTATCGGTCAAACTGAAGGAAGTACAAATAGAATCGTTGGAACCTATGGATATATGGCACCTGAGTATGCGATGCATGGAGAATTTTCGGTAAAATCAGATGTCTATAGTTTTGGAGTATTACTTCTTGAGATTATAAGTGGTCATAAAAATAGTGCAAACATTTTTCATGGGGAGGATATGGAGTATCTATTGAGCTATGCATGGAGAAGCTGGATAGAGGGGAGAGCTACTGATATTATAGATCCATCATTAAAAAACATTTCACAAAATGAAATCTTGAGATGCATCCACATTGGTTTACTCTGCATTCAAGAAAACTTGATTGATAGACCAACCATGGCTTCTGTTGCAGTCATGCTTAATAGTTATTCTCTTGCTCTCTCAATACCTTCGAAACCTGCGTATTTTATAGGAAGTGGAACTAGAATGCTACCGGACATGCAGCTACATGTTGATAACGTAGGTGCAACGAGATTGAATGAATCGATGAACCAAGTCTCAATTACTGATCCATACCCTCGGTAG 1998 0.3804 MALYPFVCCLIVIIVSQAKAIFECDNNRGNYTVNSTYDNNLKTLLYSFSSHTEINYGFYNFSYGQHPDKIKAIGLCRGDLEPNQCRRNLNNSIAYLRAKCPNQKEAILWGDDVTLRYTYRSILGSLETDPTRYFSNTMSTTEADKYIEPLSFVMRNLTDKAASGDSRRKYEADGVNTTDFSTIYGLVQCMPDLSSQQCSNCLYTAISEIDPDPFNRYYMGLGGEVVKPSCRLRFDTYRFYNSTIELESLSLQPSPSLPPSAVTNNTSLGHSKIGIVIATTVPVVTVVLVLIFICFYRLRKPKLNFEANMGKYDDGGEEDMTIVESLQFNFDIIQVATSDFSNSNKLGQGGFGIVYRGKLLNGHMIAVKRLSTNSDQGDVEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLIYEFVSNKSLDYFIFDPTRKTQLNWQTRYNIIKGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGLARRFVIGQTEGSTNRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLLLEIISGHKNSANIFHGEDMEYLLSYAWRSWIEGRATDIIDPSLKNISQNEILRCIHIGLLCIQENLIDRPTMASVAVMLNSYSLALSIPSKPAYFIGSGTRMLPDMQLHVDNVGATRLNESMNQVSITDPYPR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2204 665 ProSiteProfiles Gnk2-homologous domain profile. 128 239 IPR002902 -
Mtr5g2204 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Mtr5g2204 665 Pfam Protein kinase domain 341 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2204 665 SMART serkin_6 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2204 665 ProSiteProfiles Protein kinase domain profile. 340 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2204 665 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 655 - -
Mtr5g2204 665 Gene3D - 129 239 IPR038408 -
Mtr5g2204 665 Gene3D - 18 121 IPR038408 -
Mtr5g2204 665 CDD STKc_IRAK 346 612 - -
Mtr5g2204 665 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Mtr5g2204 665 Gene3D Transferase(Phosphotransferase) domain 1 416 619 - -
Mtr5g2204 665 ProSiteProfiles Gnk2-homologous domain profile. 19 122 IPR002902 -
Mtr5g2204 665 Pfam Salt stress response/antifungal 140 237 IPR002902 -
Mtr5g2204 665 Pfam Salt stress response/antifungal 24 118 IPR002902 -
Mtr5g2204 665 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 3 655 - -
Mtr5g2204 665 Gene3D Phosphorylase Kinase; domain 1 309 415 - -
Mtr5g2204 665 SUPERFAMILY Protein kinase-like (PK-like) 322 611 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2204 Mtr-Chr5 28711647 28716219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2204 27 665 Receptor kinase-like Gene Family AT4G21410 47.184 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g2204 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2204 - - mtr:MTR_5g065130 1308.12