Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2161 ATGGATAAATTTTGTTGTTTAAAGTCTTCTTTTTCTAAGCTTGTATCCACGCGTTCATCATGCAGCACTGGAAAAGGGAAAAATCATGAAGGATCGATAAAGTATGGTTTCACCCTAGTGAAAGGGCGAGCCAATCATCCGATGGAGGATTACCACGTCGCCAATTTTGTGCAAGTACAAGGAAAAGAATTGGGTTTGTTTGCTATTTACGATGGCCATTTGGGGGATCAAGTGCCTTCATACTTACAGAAAAATCTATTTTCCAACATTCTAAAGGAGGGTGCATTTTGGGATGACCCTGCTGCATCTATCTCAAAAGCATATCTGAACACAGATCAGGCAATTCTTTCACATAGTTCTGATTTGGGGCGTGGTGGATCAACAGCTGTTACTGCAATATTAATCAATGGTCAAATGTTATGGACAGCTAATGTAGGAGATTCACGAGCGGTTCTTTCAAGAAAAGGTCAAGCAGTGCAATTGACTACTGATCATGAGCCTAACACAGAACGAGGCATCATTGAGAATAAAGGTGGTTTTGTCTCCAACATTCCAGGCGATGTCCCTAGAGTAAATGGACAACTGGCTGTTGCTCGTGCATTTGGTGACAAGAGCCTAAAGTCTCATTTGCGATCAGACCCCGATGTACATAGTACTGATGTAGATGTTGATATTGACTTTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTTGATATTGCTAGAAAGGTGAAAGATCCACTGAAAGCAGCTAAGCAATTAACAGCTGAAGCATTAAAAAGAGAAAGTAAAGATGATATATCTTGTGTTGTGGTTAGGTTTAGGTGA 849 0.4064 MDKFCCLKSSFSKLVSTRSSCSTGKGKNHEGSIKYGFTLVKGRANHPMEDYHVANFVQVQGKELGLFAIYDGHLGDQVPSYLQKNLFSNILKEGAFWDDPAASISKAYLNTDQAILSHSSDLGRGGSTAVTAILINGQMLWTANVGDSRAVLSRKGQAVQLTTDHEPNTERGIIENKGGFVSNIPGDVPRVNGQLAVARAFGDKSLKSHLRSDPDVHSTDVDVDIDFLILASDGLWKVMANQEAVDIARKVKDPLKAAKQLTAEALKRESKDDISCVVVRFR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2161 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Mtr5g2161 282 CDD PP2Cc 33 281 IPR001932 -
Mtr5g2161 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Mtr5g2161 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Mtr5g2161 282 SMART PP2C_4 30 279 IPR001932 -
Mtr5g2161 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Mtr5g2161 282 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 1 281 - -
Mtr5g2161 282 SUPERFAMILY PP2C-like 32 281 IPR036457 -
Mtr5g2161 282 Gene3D - 29 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2161 Mtr-Chr5 28081413 28085820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2161 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.528 2.79e-148 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2161 K17506 - gmx:100797292 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2161 5 28081413 28085820 Mtr5g2161 5 28081413 28085820 ECH