Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2113 ATGAGAGATCAAAGAGTCCTTCATATTGAAGATAGTACTAGTCAAATAGAAAGGTCTAAGTGGGTTTTGGATTCTCCTAATCCACCACCTTTATGGAAGAAGCTATTTTCTTCATTGAAAGAGACCCTTTTGCCTCATGGAAACAAATTATGTTTCTCATCCAAGAACAAAAGTTTTCTTGCACTTGCTTACTCATTCTTGCAGAGTTTGTTTCCAATCCTTGTTTGGTTAAAAGATTACACTATCTCTAAATTTAAAGATGATCTTTTAGCTGGTTTAACTCTTGCAAGTCTTTGCATACCTCAGAGTATAGGTTATGCAAGTTTGGCAAAAGTTGATCCTCAATATGGCTTGTATACGAGTATTGTTCCTCCTCTTATCTATGCTGTGATGGGAAGCTCAAGAGACATTGCAATTGGACCTGTAGCTGTAGTGTCTATGCTTTTATCTTCCTTGGTCACCAATGTCATAGATCCTGTTGCTAATCCTCATGCCTATAGAGATTTTATCTTTACCGTCACCTTCTTCACCGGAATTTTTCAAGCTGCATTTGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTCATGGCAGGAGCAGCAATCATTATTGGTCTTCAGCAGCTCAAGGGTCTTTTGGGGATTACTCACTTCACCACCAAAACAGATGCAGTATCAGTATTGGTTTCTGTTTATAAGTCATTACATCAACAAATTACTTCTGAAGAAAAGTGGAGTCCTCTGAATTTTGTCCTGGGATGTTCTTTCTTGATTTTCCTGCTAGTTACCCGCTTTATAGCAAGAAAGAAGAAAAAACTTTTCTGGTTGCCTGCAATTGCTCCTCTTCTATCAGTTATACTATCAACTTTAATTGTGTATTTATCAAAAGCTGATAAACAAGGAATTAATATAATAAAGCATGTTAAAGGAGGCCTGAATCAGAGTTCAGTTCACCAGTTACAATTTCATGGTCAAAATGTCGGGCAAGCGGCTAAAATCGGATTAGTCTGTGCAGTTATCGCCCTCACTGAAGCAATGGCTGTTGGCCGATCTTTCGCTTCCATCAAAGGATACCAACTTGATGGGAACAGAGAAATGTTGTCAATGGGAATCATGAACATTGCAGGATCCTTAACTTCATGTTATGTAGCAACTGGTTCATTTTCAAGAACAGCAGTTAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCAATTACTGTGATTTTGTTCCTGCAATTATTTGCAAGGCTATTATACTACACACCTATGGCTATCCTTGCTGCTATCATCCTCTCCGCACTTCCTGGATTAATTGATATAAACGAGGCTCGCTATATCTGGAAGGTCGACAAATTAGACTTTCTTGCCTGCATCGGTGCTTTTGTTGGCGTCTTGTTTGCATCCGTAGAGATTGGTCTGCTAGTTGCAATCTCGATCTCATTTGCGAAGATCCTAATACAATCGATTCGACCTGGAGTAGAAATTCTAGGAAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTTACTCAATATCCGATGGCAATAAGCACACCAGGCATCGTTGTGATTCGCATAAGCTCCGGCTCACTCTGCTTTGCAAATGCCAATTTTGTCAAAGAAAGAATACTGAAGTGGGTCGTGGAAGAAGATGACATTCAAGAAACTGCTAAAGGAAATGTCCGTGCCATAATTATGGACATGACAAACCTCATGAATGTTGATACTTCTGGAATTCTAGCACTTGAGGAATTGCATAAGAGGTTGCTTTCACGCGGCGTAGAATTAGCTATGGTCAACCCAAGATGGCTAGTAATTCACAAGCTCAAGCTTGCACATTTTGTGGACAAAATTGGGAAACAATGGGTTTTTCTGACTGTTGGAGAGGCTGTAGACGCGTGTCTCTCTTCCAAAATTGCTACTGCTTGA 1965 0.3969 MRDQRVLHIEDSTSQIERSKWVLDSPNPPPLWKKLFSSLKETLLPHGNKLCFSSKNKSFLALAYSFLQSLFPILVWLKDYTISKFKDDLLAGLTLASLCIPQSIGYASLAKVDPQYGLYTSIVPPLIYAVMGSSRDIAIGPVAVVSMLLSSLVTNVIDPVANPHAYRDFIFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTTKTDAVSVLVSVYKSLHQQITSEEKWSPLNFVLGCSFLIFLLVTRFIARKKKKLFWLPAIAPLLSVILSTLIVYLSKADKQGINIIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNREMLSMGIMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVILFLQLFARLLYYTPMAILAAIILSALPGLIDINEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAISISFAKILIQSIRPGVEILGRVPRTEAFCDVTQYPMAISTPGIVVIRISSGSLCFANANFVKERILKWVVEEDDIQETAKGNVRAIIMDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKQWVFLTVGEAVDACLSSKIATA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2113 654 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Mtr5g2113 654 PANTHER SLC26A/SULP TRANSPORTER-RELATED 9 652 - -
Mtr5g2113 654 TIGRFAM sulP: sulfate permease 72 642 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr5g2113 654 ProSiteProfiles STAS domain profile. 540 646 IPR002645 -
Mtr5g2113 654 SUPERFAMILY SpoIIaa-like 530 646 IPR036513 -
Mtr5g2113 654 PANTHER SULFATE TRANSPORTER 9 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr5g2113 654 Gene3D STAS domain 503 649 IPR036513 -
Mtr5g2113 654 Pfam STAS domain 524 642 IPR002645 -
Mtr5g2113 654 Pfam Sulfate permease family 85 471 IPR011547 GO:0016021
Mtr5g2113 654 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2113 Mtr-Chr5 27255094 27260730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2113 14 651 Inorganic Solute Cotransporters AT5G10180 62.402 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2113 K17469 - gmx:100776591 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2113 5 27255094 27260730 Mtr5g2113 5 27255094 27260730 ECH
Mtr5g2113 5 27255094 27260730 Mtr3g2306 3 36759818 36765048 PCT