Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2098 ATGTGTAACAAAACCATCAATGAGGTATGGAGTGAGATTAACCAACAAAAAAATGTAATTGGGTCAGTGGATCATAACAATTTGCAACAATCAATTTTGGGAGAAACAACTTTGGATAATTTTCTTGCACATGCTAAGGCTATTAATGTTGGAAATCAAGAAAATGGTCATGTTATTGGTGATGAAACTCAAGTGCCATTTATTGGAGTTGAACCAAATTTGGTCATGGCTTCACAGCCAGAAGATTGGTTACCATTACAAATGCAAATGCCAATTCCATTGCAAATGCAAATGCCTTCTATCCATATCCATCAACAACATCAAGATCATCATCATCGTCTTCATCAAAATCGTCTTCATCAAAATCAACCGATAATAGGAATGTGTCCGGATTTCGGTGTTGCTAATTCGGTTTATGAGAACAAACTTATGGAAATTGGTTATTCAGAAATACCAATCGGGGCAACGACAACGCATTTATCATCTACATGTGCAGATTCAAAGGGAGGTGCTGGTGGCAGTGGCGTTGGAAGGAAGCACAAGTATTCAGATGAGATGATGGAAAAGACTATTGAGAGGAGGCAGAAGAGAATGGCGAAGAACCGCGAATCTGCTGCGAAATCAAGGGCAAAGAAACAGGTAATTAAGATTTGTCATTTTGGTCAGGCATAA 672 0.3854 MCNKTINEVWSEINQQKNVIGSVDHNNLQQSILGETTLDNFLAHAKAINVGNQENGHVIGDETQVPFIGVEPNLVMASQPEDWLPLQMQMPIPLQMQMPSIHIHQQHQDHHHRLHQNRLHQNQPIIGMCPDFGVANSVYENKLMEIGYSEIPIGATTTHLSSTCADSKGGAGGSGVGRKHKYSDEMMEKTIERRQKRMAKNRESAAKSRAKKQVIKICHFGQA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2098 223 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 196 211 IPR004827 GO:0003700|GO:0006355
Mtr5g2098 223 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 216 IPR043452 GO:0003700|GO:0045893
Mtr5g2098 223 PANTHER TRANSCRIPTION FACTOR BZIP FAMILY-RELATED 2 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2098 Mtr-Chr5 26920795 26921466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2098 1 213 bZIP Transcription Factor Family AT2G41070 28.169 1.31e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2098 K14432 - gmx:100808654 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2098 5 26920795 26921466 Mtr5g2098 5 26920795 26921466 ECH