Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2096 ATGGGATCATCCAGAACAATAAACTCAGGGATATCTTTGTTTGAAATTGAATATGGACGTTGGATTGAAGAACAAGATCGACAAAACGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTGATATACAACTTCATCTACTTGTCGAGAGTAGCTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGATTGATTCTTTATATTTAATCTCTGGCGCATGGAAGAAGCCGTTAGAACGCCTTTTTCTTTGGTTTGGAGGATCCTGTCCGTCACAGCTTCTAAACATCGTTGTACCGAAGCTCGATGCTTTAACTGATCAACAAATTGTTAACGTTAACAACCTTCGTTTATCCTCTCTTCAAGCTGAAGATGCTCTAACAGAAGGGTTAGAAAAACTACAGCAGAGTATGATCAACAACATTCAAGCTGATCCACTGGATTTTGGAAACTACGGCTTTCAGATGGCAGCTGCTGCCATTGAGAAAGTTGAAGCATTAGAAAGTTTTGTAAACCAGGCAGATCACCTCAGGCAACAAACTCTGGTGTACATGTCTCGTATCTTGACAATTGTGCAAGCTGCTCAAGGCTTGCTGGCTATGGGGGATTACTTTCACCGTCTTCGCACTTGTAGTTCTTTGTGGACTTCTCGTTCATGTATCTCTTTATTTGAAATCGAATATGGACGCTGGATTGAAGAGCAAGATAGACAAAACAAAGAACTAAGAAATGCTTTGCATAATAATGCATCTGATATACAACTTCATCTACTTGTTGAGAGTAGCTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGACTGATGTTTTCTATTTAATCTCTGGCGTATGGAAGAAGCCGTTAGAACGCCTTTTTCTTTGGTTTGGAGGATACCATCCATCACAGCTTCTAAATATCATTGTTCCCAAGGTTGATGCTTTAACTGATCAACAAATTGTTGACATTAACAATCTCCGCTTATCCATTCTGCAAGCTGAAGAGGCTCTAACACAAGTGTTAGAAAAAATCAAGCAGAGTATGATCAGCAGCATTCAAGCTGATCCCATGGATTTCGGAAACCACGGCTTTCAGATGGCTGCTGCCATGGACAAAGTAGAAGCAGTACCATCTTTTATAATCCAGGCAGATCACCTTAGGCAAGAAACTCTGGTGCAGATGTCTCACATCCTAACAATTAGGCAAGCAGCTCAAGGTTTTTTGGCTATGGGGGGATACTTTCACTTGCTTCGTAATTTTAGGACTCGTTTGATGTCCAAGATATAA 1311 0.3989 MGSSRTINSGISLFEIEYGRWIEEQDRQNEELRNALQTNASDIQLHLLVESSLNQYSNLFRMKAEAAKIDSLYLISGAWKKPLERLFLWFGGSCPSQLLNIVVPKLDALTDQQIVNVNNLRLSSLQAEDALTEGLEKLQQSMINNIQADPLDFGNYGFQMAAAAIEKVEALESFVNQADHLRQQTLVYMSRILTIVQAAQGLLAMGDYFHRLRTCSSLWTSRSCISLFEIEYGRWIEEQDRQNKELRNALHNNASDIQLHLLVESSLNQYSNLFRMKAEAAKTDVFYLISGVWKKPLERLFLWFGGYHPSQLLNIIVPKVDALTDQQIVDINNLRLSILQAEEALTQVLEKIKQSMISSIQADPMDFGNHGFQMAAAMDKVEAVPSFIIQADHLRQETLVQMSHILTIRQAAQGFLAMGGYFHLLRNFRTRLMSKI* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2096 436 Coils Coil 236 256 - -
Mtr5g2096 436 ProSiteProfiles DOG1 domain profile. 225 435 IPR025422 GO:0006351|GO:0043565
Mtr5g2096 436 PANTHER FACTOR TGA7, PUTATIVE-RELATED 228 427 - -
Mtr5g2096 436 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 224 - -
Mtr5g2096 436 Pfam Seed dormancy control 30 103 IPR025422 GO:0006351|GO:0043565
Mtr5g2096 436 Pfam Seed dormancy control 243 317 IPR025422 GO:0006351|GO:0043565
Mtr5g2096 436 ProSiteProfiles DOG1 domain profile. 11 222 IPR025422 GO:0006351|GO:0043565
Mtr5g2096 436 Coils Coil 331 351 - -
Mtr5g2096 436 Coils Coil 22 42 - -
Mtr5g2096 436 PANTHER TRANSCRIPTION FACTOR TGA9 1 224 - -
Mtr5g2096 436 PANTHER TRANSCRIPTION FACTOR TGA9 228 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2096 Mtr-Chr5 26896490 26901016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2096 223 426 Calmodulin-binding Proteins AT1G77920 52.195 2.67e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2096 K14431 - gmx:100526976 337.421