Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2087 ATGAATCACTTACCACGAATTTTCGGTTATAGAAACAAATCAACTACGGAAATGAACTCCAAGAAGAAGAAACAACCCAAGTTACAACGTCGTAATGCGGTGAAGAATTTCAACTACGATGCTCAACCGTCTTCGTCGTCACCGGAATCTTCCGAGTCGGTGTCGTCGTCGATTCTCTGTACTCGATCGATGGATTTTTACGATCGGAAAAGCTTTAGAGTTGAAGGTGTTGACGGAGAATTTGATATTATTTGTCGGAGTTTAGGGTTGAATGGACCGGAGGATTTCTCGATTCCGGCGGCGGCTTGGGAGGCGATGAAGGTTCGGTCTTCTTCAGATGTTCTGCCGAGGCTGAATGTTACGGAATTCGATGAAACGAAGGTGAGTGATGAAATTGATGAAGTTGGAGTAGTTGAGTGTGATGATAGGGTTTTGGTTAGAGATTCTCCGGCGGAGAGTAGTGTCGGTGATAGTGGTGGAGAAGTTAATGTTTCAATTAGAGATTCGCCGGCGGAGAGTAGTGGTTGCTGCACCGGCGGTGAAATTAGGGTTTCGGTTAGGGGTTTTGATGAGACAAGCAGTTGTTCAACCGGCAGCGGTGGTATTAAGGGAATTAGACCGCCGATGCTTAAGCCGCCGCCAGGGGTTCGGGTTTCTGTTGTGGATGACACGTGTTCAACGTGGGATATTCTGAGGGATTTTGCTCCGGAAGGGGAAGGAAAAGAGAGAGAAGAAGAGGAAGAGGAAGAGAAGGTAGATGAAGTAGAAGAAAAAGGGGAAGCTGATGAAGTGGGATTGAAGATAGAAGAAGAGGAAAATGGTGACATTATTGGTGAGTTTTCAAGGTCGTGTTCATTTACTACTTCACAAGAAGATGATTCATCTAGCACGACGACGGATACTAGGTCGAATAGTATATCTCCTAATGTGAGATTGAAGCCTGTAATTACTCCTGGGAGTTGGCAAAAGGGTGAGCTTTTGGGCCGTGGTTCATTTGGAACTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAACAAAGTGTCGTTCAACTGGAGCACGAAATTGCACTTCTGAGTCAGTTTGAACATGAGAATATTGTTCGATACATTGGCACTGAAATGGATGAATCAAATCTATATATTTTTATCGAGTTTGTAACCAAAGGTTCCCTTTTAAGCCTCTACCGGAGGTATAAACTTCGAGATTCCCAAGTATCTGCTTATACGAGACAGATTCTGCATGGTTTGAAGTATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTTGATGCAAATGGATCTGTCAAGGTTGCAGATTTTGGATTAGCAAAGGCAATTAAACTGAATGATGTTAAATCATGCCAAGGAACAGCATTCTGGATGGCACCAGAGGTTGTAAGAGGAAAAGTTAAAGGTTATGGACTTCCGGCTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGCAAGTTCCATACGCTCCTATGGAATGTATCAGCGCAGTGTTTAGAATTGGAAAAGGTGAACTACCTCCAGTGCCTGATACTCTTTCAAGAGATGCACGCGATTTTATTCTGCATTGTCTTAAAGTTAATCCAGATGATCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTGTCCAGAGGTCATTCTCCCAGTCCTCTGGCTCAGCGTCTCCACATATTCCGAGAAGAAGTTAA 1782 0.4332 MNHLPRIFGYRNKSTTEMNSKKKKQPKLQRRNAVKNFNYDAQPSSSSPESSESVSSSILCTRSMDFYDRKSFRVEGVDGEFDIICRSLGLNGPEDFSIPAAAWEAMKVRSSSDVLPRLNVTEFDETKVSDEIDEVGVVECDDRVLVRDSPAESSVGDSGGEVNVSIRDSPAESSGCCTGGEIRVSVRGFDETSSCSTGSGGIKGIRPPMLKPPPGVRVSVVDDTCSTWDILRDFAPEGEGKEREEEEEEEKVDEVEEKGEADEVGLKIEEEENGDIIGEFSRSCSFTTSQEDDSSSTTTDTRSNSISPNVRLKPVITPGSWQKGELLGRGSFGTVYEGISEDGFFFAVKQVSLLDQGSQGKQSVVQLEHEIALLSQFEHENIVRYIGTEMDESNLYIFIEFVTKGSLLSLYRRYKLRDSQVSAYTRQILHGLKYLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAIKLNDVKSCQGTAFWMAPEVVRGKVKGYGLPADIWSLGCTVLEMLTGQVPYAPMECISAVFRIGKGELPPVPDTLSRDARDFILHCLKVNPDDRPTAAQLLDHKFVQRSFSQSSGSASPHIPRRS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2087 593 MobiDBLite consensus disorder prediction 193 214 - -
Mtr5g2087 593 MobiDBLite consensus disorder prediction 240 257 - -
Mtr5g2087 593 PRINTS Tyrosine kinase catalytic domain signature 399 412 IPR001245 GO:0004672|GO:0006468
Mtr5g2087 593 PRINTS Tyrosine kinase catalytic domain signature 434 452 IPR001245 GO:0004672|GO:0006468
Mtr5g2087 593 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Mtr5g2087 593 PRINTS Tyrosine kinase catalytic domain signature 543 565 IPR001245 GO:0004672|GO:0006468
Mtr5g2087 593 ProSiteProfiles Protein kinase domain profile. 321 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2087 593 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 67 587 - -
Mtr5g2087 593 Pfam Protein kinase domain 322 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2087 593 MobiDBLite consensus disorder prediction 31 54 - -
Mtr5g2087 593 SUPERFAMILY Protein kinase-like (PK-like) 299 579 IPR011009 -
Mtr5g2087 593 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 67 587 - -
Mtr5g2087 593 MobiDBLite consensus disorder prediction 258 277 - -
Mtr5g2087 593 SMART serkin_6 321 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2087 593 MobiDBLite consensus disorder prediction 233 309 - -
Mtr5g2087 593 MobiDBLite consensus disorder prediction 280 309 - -
Mtr5g2087 593 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Mtr5g2087 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Mtr5g2087 593 Gene3D Transferase(Phosphotransferase) domain 1 319 589 - -
Mtr5g2087 593 Coils Coil 238 261 - -
Mtr5g2087 593 MobiDBLite consensus disorder prediction 1 54 - -
Mtr5g2087 593 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2087 Mtr-Chr5 26664937 26673552 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2087 6 578 MAP Kinase Kinase Kinase AT4G08500 51.325 2.03e-176 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr5g2087 Pkinase 5.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2087 K13414 - gmx:100819177 707.597