Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2086 ATGAGTGACTACCCTGCTGCCTTTGAGAAGAAGGAAATTGAAGCCGCATTCTTTGTTGCGCCTCATGCTAAAGTATTTCTAGCAAAGTACTCGTGTAAGGGCTTCATCAAAGTGGGGAACATTTTCAGGCTTGGCGGCTTTGGTTTTGTATTTCCAAAAGGTTCAAGTCTAGTTGCTGACATATCAGAGGCATTGCTGAATGTGATAGAGAGCGGAGAAACAGAACAGCTCGAAAAAAATATGTTGAACGAGATAGAGAGTGAAAGCAAAGCCAATTGTTCTTCTTTAGAGAGCAACAAGGGGAAAAATAATTCATCGATAGGCCTTCAGCCTTTCCTTGCTCTGTTTTCAATCTGTTCTTTTTTTGCTATTCTTGCGTTGTCATATCACATGATTTGTTGTTAG 405 0.4049 MSDYPAAFEKKEIEAAFFVAPHAKVFLAKYSCKGFIKVGNIFRLGGFGFVFPKGSSLVADISEALLNVIESGETEQLEKNMLNEIESESKANCSSLESNKGKNNSSIGLQPFLALFSICSFFAILALSYHMICC* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2086 134 Gene3D - 48 79 - -
Mtr5g2086 134 SUPERFAMILY Periplasmic binding protein-like II 3 79 - -
Mtr5g2086 134 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 133 - -
Mtr5g2086 134 Gene3D - 13 47 - -
Mtr5g2086 134 PANTHER GLUTAMATE RECEPTOR 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2086 Mtr-Chr5 26661645 26662581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2086 13 127 Ion Channels AT5G27100 33.043 1.01e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2086 - - mtr:MTR_5g059920 252.677