Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2085 ATGGGGAGAAAATCTTCATTGCAACTAAGTATTCTTTGCTTCAATATTGTCCTGTTATTGTTGGCATGGTCAAGAGTGAAAAGAAGCCACTGCTTAGTGCCACAACAAAAGTCTGTTATGAGCATAGGTGTTGTGCTTGATTTGGTTTCATTAATGGGAAAACATCAAAAGATAGCAATGGAAATTGCAGTCAAAGAGTTCAACAACCAATTGAGTTCGTCCAAGCTGGATTTGCAGATAAAAGATTCACATGGCAATTCTGCACAAGTTATTTCAAGTGTTATGGATCTCTCACGGAGCGACCAGGTGCTGGCCATCGTAGGAACGATTACACACAAAGAAGCAACACTTGCTAGTGAATTCGACGACAACATAAAGAACAATCCTATCTTGTCTCTAACTTCATTTGCTGGCAGACAAGAATTATTATCTCCTAGATTGCCACATTTCATCCAACTCAGAGATGATATTAACCATCACATCCAATGCATTGCAGCAATTGTAGGAGAATTCAGATGGAAAAAGGTGGCAGTAATTTATGAACATAATAATGACGACTTTTCCTCTGATCCAGAAATAATACTTAGCCTCTCCAATTCTCTTAAACTTGCTGGTTCTGAAATTGAAAGCCATTTAGCTATTCCTTCTTTATCCACACTTTCAGACGCAGAATCTACAATTGAAAATGAGCTTAATGAGTTGAAAAGGAAGAGTAATAGGGTCTTCTTGATTGTTCGTTCTTCTTTAGAGTTGGCTAATATTATTTGTGAGAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCGGTGTGGATTATCCCGGACGAGGTTGCTGGCCTACTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAGAACACACTTCATAGAAATGAATAAGGCTTTCAGAAAGTTTAAATTCCTATTCCAAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAGCGTTAACCCAAGTAACTTTGCACTTCAAGCATATTATGCAACTAAAGCTATTGCTGAAGCTGCAAATAAATTATCACAAGTAAAGTTCAGACTTGAACAATTCTCAGAAAAGATTTTGTCTAGTAAATTTGAAAGACTGAGCGCAAAGACTTTCTCCAAGAATGGACGATTTCTCCAATCACCAACCTTCAACATAATTAATGTGATTGGGAAAAGTTATAGAGAATTGGGATTTTGGTCTTCAACACTTGGTTTTTCAAAGAACATAGTGAGACATCAAGTAATGGAGACGACAAACGCAACTCATGATTCTGATGGAGTTTTCAGCACAGTTTATTGGCCTGGAGATTTACAATCTGTTCCCAGGGGATGGATTCACGGTAACGAGGAAAGGTTATTGAAAATAGGAGTGCCTGCCAATGGTGTCTTTACTCAATTTGTGAATGTAACACATGACAGTAGGAATGGAACTTTGATAACTGGTTTCTCTATCGGAGTCTTTAAAGTTGTTGTCGAACGTTTACCTTATTATTTACAGTACAGTTTTATTCCGTTCAATGGCTCATACGATGAAATGGTTTATCAGGTCTACAATAAGACATTGGATGCTGCAGTTGGTGACACAGCCATAGTGGAATACAAGTAA 1632 0.3744 MGRKSSLQLSILCFNIVLLLLAWSRVKRSHCLVPQQKSVMSIGVVLDLVSLMGKHQKIAMEIAVKEFNNQLSSSKLDLQIKDSHGNSAQVISSVMDLSRSDQVLAIVGTITHKEATLASEFDDNIKNNPILSLTSFAGRQELLSPRLPHFIQLRDDINHHIQCIAAIVGEFRWKKVAVIYEHNNDDFSSDPEIILSLSNSLKLAGSEIESHLAIPSLSTLSDAESTIENELNELKRKSNRVFLIVRSSLELANIICEKAKQIGLMEKGSVWIIPDEVAGLLDSVNSSVIFNMQGVVGFRTHFIEMNKAFRKFKFLFQRKFALEYPEEDSVNPSNFALQAYYATKAIAEAANKLSQVKFRLEQFSEKILSSKFERLSAKTFSKNGRFLQSPTFNIINVIGKSYRELGFWSSTLGFSKNIVRHQVMETTNATHDSDGVFSTVYWPGDLQSVPRGWIHGNEERLLKIGVPANGVFTQFVNVTHDSRNGTLITGFSIGVFKVVVERLPYYLQYSFIPFNGSYDEMVYQVYNKTLDAAVGDTAIVEYK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2085 543 Gene3D - 29 154 - -
Mtr5g2085 543 SUPERFAMILY Periplasmic binding protein-like I 36 453 IPR028082 -
Mtr5g2085 543 Coils Coil 217 240 - -
Mtr5g2085 543 Pfam Receptor family ligand binding region 57 361 IPR001828 -
Mtr5g2085 543 Gene3D - 156 333 - -
Mtr5g2085 543 SUPERFAMILY Periplasmic binding protein-like II 438 541 - -
Mtr5g2085 543 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 542 - -
Mtr5g2085 543 Gene3D - 457 543 - -
Mtr5g2085 543 PANTHER GLUTAMATE RECEPTOR 36 542 - -
Mtr5g2085 543 Coils Coil 346 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2085 Mtr-Chr5 26659086 26661600 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2085 14 540 Ion Channels AT2G29120 29.982 5.39e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2085 - - mtr:MTR_5g059920 987.252