Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2083 ATGGGGAGAAATTCTTCATTGCAACTAAGTATTCTTTGCTTCAATATTGTCCTGTTATTGTTGGCATGGTCAAGAGTGAAAAGAAGCCACTGCTTAGTGCCGAAACAAAAGTCTGTTATGAGCATAGGTGTTGTGCTTGATTTGGTTTCATTAATGGGAAAACATCAAAAGATAGCAATGGAAATTGCAGTCAAAGAGTTCAACAACCAATTGAGTTCGTCCAAGCTGGATTTGCAGATAAAAGATTCACATGGCAATTCTGCACAAGTTATTTCAAGTGTTATGGATCTCTCACGGAGCAACCAGGTGCTGGCCATCGTAGGAACGATTACACACAACGAAGCAACACTTGCTAGTGAATTCGACGACAACATAAAGAACACTCCTATCTTGTCTCTAACTTCATTTGCTGGCAGACAAGAATTATTATCTCCTAGATTGCCACATTTCATCCAACTCGGAGATGATATTAACCATCACATCCAATGCATTGCAGCAATTGTAGGAGAATTCAGATGGAAAAAGGTGGCAGTAATTTATGAACATAATAATGACTACTTTTCCTCTGATCCAGAAATAATACTTAGCCTCTCCAATTCTCTTAAACTTGCTGGTTCTGAAATTGAAAGCCATTTAGCTATTCCTTCTTTATCCACACTTTCAGACGCAGAATCTACAATTGAAAATGAGCTTAATAAGTTGAAAAGGAAGAGTAATAGGGTCTTCTTGATTGTTCGTTCTTCTTTAGAGTTGGCTAATATTATTTGTGAGAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCGGTATGGATTATCCCGGACGAGGTTGCTGGCCTACTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAGAACACACTTCATAGAAATGAATAAGGGTTTCAGAAAGTTTAAATTCCTATTCCGAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAGTGTTAACCCAAGTAACATTGCACTTCAAGCATATTATGCAACTAAAGCTATTGCTGAAGCTGCAAATAAATTATCACAAGGAAAGTTCAGACTTGAACAATTCTCAGAAAAGATTTTGTCAAGAAAATTTGAAAGACTGAGCGCAAAGACTTTCTCCAAGAATGGACAATTTCTCCAATCACCAACCTTCAACATAATTAATGTGATTGGGAAAAGTTATAGAGAATTGGCACTTTGGTCTTCAACACTTGGTTTTTCAAAGAACATAGTTAGACATCAAGTGATGGAGATGACAAACACAACTAATGATTCTAATGGAGTTTTCAGCACAGTTTATTGGCCTGGAGATTTTCAATCGGTTCCCAAGGGATGGATTCACAGTAACGAGGATAGGTCATTGAAAATAGGAGTGCCTGCCAATGGTGTCTTTACTCAGTTTGTGAATGTAACACATGACAGTAGGAATGGAACTTTGATAACAGGTTTCTCTATCGGCGTCTTTAAAGTAGTTGTCGAACGTTTACCTTATGATTTACAGTACAAGTTTATCCCGTTCAATGGCTCATACGATGAAATGGTTTATCAGGTCTACAATAAGACATTGGATGCTGCAGTTGGTGACACAGCGATAGTGGAATACAGATATCATTTAGTGGACTTTTCACAACCGTATGTTGAATCTGGCCTCCAGATGGTGGTTACTGAGCAACCAGCAAAATCAAAAGAAACATGGATGTTTTTGGATGCCTTTACGAAAGAGATGTGGCTGATGATAGCAGCTACGCATATTTTTGTAGGTGTTGTTATTTGGTTGATTGAACGGGAAGCTAACCCAGATCTTAGGGGTTTCGGATCGATGCTTTGGTTTTTAGTCACAGTACTATTTTATGCACATAGAGAACCAATAAGAAAACCATTAGCTCAGGTTGTACTGACGCCCTGGTTATTTGCTATTTTCATTGTGACAAATAGTTTCACAGCAAGTTTGACATCCATAACTATTTCACAAGTAAAGCCATCGGTGTTAGATATCCAGACCCTTAAAGAAAGAAATTCACCAGTCGGGTGTAATGGAAATTCATTTATTGTGAAGTATTTGATTGACGTACTAAAGTTTAAGCCTGAGAATATTAGGAAAATAAATTCCATGAGTGACTACGCTGCTGCCTTTGAGAAGAAGGAAATTGAAGCTGCCTTCTTTGTTGCGCCTCATGCTAAAGTCTTTCTAGCAAAGTACTCATGTAAGGGCTTCATCAAAGTGGGGAACGTTTTCAGGCTTGGCGGCTTTGGTTTTGTATTTCCAAAAGGTTCAAGTCTAGTTGCTGACATATCAGAGGCATTGCTGAATATGATAGAGAGCGGAGAAACAGAACAGCTCGAAAAAAATATGTTGAACGAGATAGAGAGTGAAAGCAAAGCCAATTGTTCTTCTTTAGAGAGCAACAAGGGGAAAAATAATTCATCTATAGGCCTTCAGCCTTTCCTTGGTCTGTTTTCAATCTGTTCTATTTTTGCTGTTCTTGCATTGTCATATCACATGATTTGTTTGTTAGTGAAGAATGTAGAAACTTTGAGAAAACACACAGTTTTAGCATTAACACGATTATGGAGATGTACAACCAAGTTTTTTGCTTGGTGTCGTTCGAAACTCCAATCAAGAATCTTAAGAAGAGTAAGAAATAACAGTGAAACAAGAAATGCATCAGAGGAGAATGTCACTAATAGCCAGCAAATTCTAGTAGTGGTTGAGTTTGTCGATAATGTACTGGCTGCTCATGCTTCATGA 2772 0.3781 MGRNSSLQLSILCFNIVLLLLAWSRVKRSHCLVPKQKSVMSIGVVLDLVSLMGKHQKIAMEIAVKEFNNQLSSSKLDLQIKDSHGNSAQVISSVMDLSRSNQVLAIVGTITHNEATLASEFDDNIKNTPILSLTSFAGRQELLSPRLPHFIQLGDDINHHIQCIAAIVGEFRWKKVAVIYEHNNDYFSSDPEIILSLSNSLKLAGSEIESHLAIPSLSTLSDAESTIENELNKLKRKSNRVFLIVRSSLELANIICEKAKQIGLMEKGSVWIIPDEVAGLLDSVNSSVIFNMQGVVGFRTHFIEMNKGFRKFKFLFRRKFALEYPEEDSVNPSNIALQAYYATKAIAEAANKLSQGKFRLEQFSEKILSRKFERLSAKTFSKNGQFLQSPTFNIINVIGKSYRELALWSSTLGFSKNIVRHQVMEMTNTTNDSNGVFSTVYWPGDFQSVPKGWIHSNEDRSLKIGVPANGVFTQFVNVTHDSRNGTLITGFSIGVFKVVVERLPYDLQYKFIPFNGSYDEMVYQVYNKTLDAAVGDTAIVEYRYHLVDFSQPYVESGLQMVVTEQPAKSKETWMFLDAFTKEMWLMIAATHIFVGVVIWLIEREANPDLRGFGSMLWFLVTVLFYAHREPIRKPLAQVVLTPWLFAIFIVTNSFTASLTSITISQVKPSVLDIQTLKERNSPVGCNGNSFIVKYLIDVLKFKPENIRKINSMSDYAAAFEKKEIEAAFFVAPHAKVFLAKYSCKGFIKVGNVFRLGGFGFVFPKGSSLVADISEALLNMIESGETEQLEKNMLNEIESESKANCSSLESNKGKNNSSIGLQPFLGLFSICSIFAVLALSYHMICLLVKNVETLRKHTVLALTRLWRCTTKFFAWCRSKLQSRILRRVRNNSETRNASEENVTNSQQILVVVEFVDNVLAAHAS* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2083 923 Gene3D - 156 331 - -
Mtr5g2083 923 Gene3D - 662 756 - -
Mtr5g2083 923 Pfam Receptor family ligand binding region 57 378 IPR001828 -
Mtr5g2083 923 Gene3D - 32 155 - -
Mtr5g2083 923 Pfam Bacterial extracellular solute-binding proteins, family 3 488 790 IPR001638 -
Mtr5g2083 923 Gene3D - 757 790 - -
Mtr5g2083 923 SUPERFAMILY Periplasmic binding protein-like I 39 453 IPR028082 -
Mtr5g2083 923 SUPERFAMILY Periplasmic binding protein-like II 438 790 - -
Mtr5g2083 923 PANTHER GLUTAMATE RECEPTOR 36 885 - -
Mtr5g2083 923 SMART GluR_14 461 795 IPR001320 GO:0015276|GO:0016020
Mtr5g2083 923 CDD GluR_Plant 462 793 - -
Mtr5g2083 923 Coils Coil 217 240 - -
Mtr5g2083 923 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 885 - -
Mtr5g2083 923 PIRSF IGluLR_plant 5 911 IPR017103 -
Mtr5g2083 923 Pfam Ligand-gated ion channel 791 831 IPR001320 GO:0015276|GO:0016020
Mtr5g2083 923 Gene3D - 455 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2083 Mtr-Chr5 26579074 26585961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2083 31 859 Ion Channels AT2G29120 31.409 4.54e-110 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2083 - - mtr:MTR_5g059920 1783.07