Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2081 ATGGATCTCTCACGGAGAAACCAGGTGCTGGCCATTGTAGGAACGATTACACACAACGAAGCAACAATTGCTAGTGAACTCAACGACAACATAAAGAACACTCCTATCTTGTCTCTAACTTCATTTGCTGGCAGACAAGAATTATTATCTCCTAGATTGCCACATTTCATCCAATTAGGAGATGATATTAACCATCACATCCAATGCATTGCAGCAATTGTAGGAGAATTCAGATGGAAAAAGGTGACAGTAATTTATGAACATAATAATGACGACTTTTCCTCTGATCCAGAAATAATACTTTGTCTCTCTAATTCTCTCAAACTTGTTGGTTCTGAAATTGAAAGCCATTTAGCTTTTCCTTCTTTATCCACACTTTCAGACGCAGAATCTACAATTGAAAATGAGCTTAATAAGTTGAAAAGGAAGAGTAATAGGGTCTTCTTGATTGTTCGTTCTTCTTTAGAGTTGGCTAATATTATTTGTGAGAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCGGTGTGGATTATCCCGGATGAGGTTGCTGGCCTACTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAGAACACACTTCATAGAAATGAATAAGGCTTTCAGAAAGTTTAAATTCCTATTCCGAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAGCGTTAACCCAAGTAACTTTGCACTTCAAGCATATTATGCAGCTAAAGCTATTGCTGAAGCTGCAAATAAATTATCACAAGGAAAGTTCAGACTTGAACAATTCTCAGAAAAGATTTTGTCTAGTAAATTTGAAAGACTGAGCGCAAAGACTTTCTCCAAGAATGGACAATTTCTCCAATCACCAACCTTCAACATAATTAATGTGATTGGGAAAAGTTATAGAGAATTGGCACTTTGGTCTTCAACACTTGGTTTTTCAAAGAACATAGTTAGACATCAAGTGATGGAGACGACAAACGCAACTAATGATTCTAATGGAGTTTTCAGCACAGTTTATTGGCCTGGAGATTTTCAATCAGTTCCCAAGGGATGGATTCACAGTAACGAGGATAGGTCATTGAAAATAGGAGTGCCTGCCAATGGTGTCTTTACTCAGTTTGTGAATGTAACGCATGACAGTAGGAATGGAACTTTGATAACAGGTTTCTCTATCGGCGTCTTCAAAGTAGTTGTCGAACGTTTACCTTATGATTTACAGTACAAGTTTATCCCGTTCAATGGCTCATACGATGAAATGGTTTATCAGGTCTACAATAAGACATTGGATGCTGCAGTTGGTGACACAGCCATAGTGGAATACAGATATCATTTAGTGGACTTTTCACAACCATATGTTGAATCTGGCCTCCAGATGGTGGTTACTGAGCAACCCGTAAAATCAAAAGAAACATGGATGTTTTTGGATGCCTTTACAAAAGAGATGTGGCTGATGATAGCAGCTATGCATATTTTTGTAGGTGTTGTTATTTGGTTGATTGAACGGGAAGCTAACCCAGATCTTAGGGGTTTTGGATCGATGCTTTGGTTTTTAGTCACAGTACTATTTTATGCACATAGAGAACCAATAAGAAAACCATTAGCTCAAGTTGTACTGACACCATGGTTATTTGCTATTTTCATTGTGACAAATAGTTTCACAGCAAGTTTGACATCAATAACTATTTCGCAAGTAAAACCATCGGTGTTAGATATCCAGACTCTTAAAGAAAGAAATTCACCAGTCGGGTGTAATGGAAATTCCTTTATTGTGAAGTATCTGACTGACGTATTAAAGTTTAAGCCTGAGAATATTAGGAAAATAAATTCCATGAGTGACTACCCTGCTGCCTTTGAGAAGAAGGAAATTGAAGCCGCATTCTTTGTTGCGCCTCATGCTAAAGTATTTCTAGCAAAGTACTCGTGTAAGGGCTTCATCAAAGTGGGGAACGTTTTCAGGCTTGGCGGCTTTGGTTTTGTATTCCCAAAAGGTTCAAGTCTAGTTGCTGACATATCAGAGGCATTGCTGAATATGATAGAGAGCGGAGAAACATAA 2076 0.3776 MDLSRRNQVLAIVGTITHNEATIASELNDNIKNTPILSLTSFAGRQELLSPRLPHFIQLGDDINHHIQCIAAIVGEFRWKKVTVIYEHNNDDFSSDPEIILCLSNSLKLVGSEIESHLAFPSLSTLSDAESTIENELNKLKRKSNRVFLIVRSSLELANIICEKAKQIGLMEKGSVWIIPDEVAGLLDSVNSSVIFNMQGVVGFRTHFIEMNKAFRKFKFLFRRKFALEYPEEDSVNPSNFALQAYYAAKAIAEAANKLSQGKFRLEQFSEKILSSKFERLSAKTFSKNGQFLQSPTFNIINVIGKSYRELALWSSTLGFSKNIVRHQVMETTNATNDSNGVFSTVYWPGDFQSVPKGWIHSNEDRSLKIGVPANGVFTQFVNVTHDSRNGTLITGFSIGVFKVVVERLPYDLQYKFIPFNGSYDEMVYQVYNKTLDAAVGDTAIVEYRYHLVDFSQPYVESGLQMVVTEQPVKSKETWMFLDAFTKEMWLMIAAMHIFVGVVIWLIEREANPDLRGFGSMLWFLVTVLFYAHREPIRKPLAQVVLTPWLFAIFIVTNSFTASLTSITISQVKPSVLDIQTLKERNSPVGCNGNSFIVKYLTDVLKFKPENIRKINSMSDYPAAFEKKEIEAAFFVAPHAKVFLAKYSCKGFIKVGNVFRLGGFGFVFPKGSSLVADISEALLNMIESGET* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2081 691 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 690 - -
Mtr5g2081 691 Gene3D - 361 488 - -
Mtr5g2081 691 SMART GluR_14 367 691 IPR001320 GO:0015276|GO:0016020
Mtr5g2081 691 Coils Coil 123 146 - -
Mtr5g2081 691 Pfam Receptor family ligand binding region 2 274 IPR001828 -
Mtr5g2081 691 Gene3D - 566 662 - -
Mtr5g2081 691 CDD GluR_Plant 368 690 - -
Mtr5g2081 691 Pfam Ligand-gated ion channel 487 593 IPR001320 GO:0015276|GO:0016020
Mtr5g2081 691 Pfam Bacterial extracellular solute-binding proteins, family 3 394 690 IPR001638 -
Mtr5g2081 691 Gene3D - 663 690 - -
Mtr5g2081 691 SUPERFAMILY Periplasmic binding protein-like I 2 359 IPR028082 -
Mtr5g2081 691 SUPERFAMILY Periplasmic binding protein-like II 344 690 - -
Mtr5g2081 691 Gene3D - 62 239 - -
Mtr5g2081 691 PANTHER GLUTAMATE RECEPTOR 1 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2081 Mtr-Chr5 26569053 26573636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2081 3 687 Ion Channels AT5G11210 31.918 6.01e-108 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2081 - - mtr:MTR_5g059920 1304.27