Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2071 ATGGATGGGAACCCTAAATCTAACCCTTCGCATCTTCCTAACCCTTCCTCTTCCGAACTCCTCCGCCAATTTCAAGTAGCTCTTAAACGCCGTCGAAACCCCGGTGGTGCGTTGCAATCGAATATTATTCGACCAAAGCGTTCTGCTGTTGCTGAAGCAAAGGCTATGAGCAAATCTGAAGATTCTCAAACGAGTTTGGATCAATCTGGGAATCATTCGCTAAAGGGTAGTGCTGTTGTTGCTGGAGAGGGGTTCAGTGATGTTAAGGTCTGTGAGTTGGAGAACATATCATCTCACTTGAGTTCACTTGCATTGACAGAAATGGATTTGGCAAGTGGCGTAACTGAAGCATCAACCAGAATCAATCAAGACATGAAGTACAGAACTAGTCAACAGGCAGAGTCTGAAAAAAGCTTGATATCTAAGGGAGGAAAAATTTCTATGTTGCCAAGGAGAACGTTAATTTCTCAAGATCATTCAGACAAATTCAAAAACTTTTTAAGTCAACCAGCTACACAATCTTCTATAGTTGGTCCATCTTGTGCGACAACTACATCAGTCCATTCAAGTTCAGCTCCAATGCTGAATTCTCTAACTGGTTCTTCTCATTCCCATCCAAATAGTGCCTCAAATTTGGTTGCAAACCGTTGTGGGAACCTCAATCCTCATCAAATAACTCACGGGGTTGTTAATTCAGTAAAAGAAACCAATATAACATCAACTGATCAAGCAACTACTGGGGTCCAAGCTTGTAGTTCACTTACTGATGCTGAATTGACGTTTAAGGAGAGAAACTCATGTAAGGAGCAGCAAGGATGCGCATTAAAGGAAACTATCATTTCAAATAATGCTTCCTGTTATGATGATGCGTTAAGTAAAGGAAAAGAGTCTGCAGTTGCTACCAACACTCAGCCTGAGGCTCCAACTGTATCTTCAGATGTAAAGTTGGAGTCTTCAAAGTTAGGTAAACCAGATAAAGCTGCCAGTTCCAAAGGACCATCAGGTTCTCGGAAAAGGACCTACGACCCTGATTATTTTTTTAAAGTTAGTGGCAAGCTATATCAAAGGCTTGGCAGAATAGGAAGTGGTGGAAGTAGTGAGGTACACAAAGTGATTTCATCCGACTGTACAATCTATGCACTTAAAAAGATAAAGCTTAAGGGTCGTGACTATGCCACTGCATATGGATTTTGTCAAGAGATTGAATATCTTAACAGGTTGAAAGGGAAAAGTAATATCATACAACTTATAGATTATGAGGTGACTGACAAGGCTTTGCTTGAGGGAGTCTTGAGTGGCTCCTTCAACAATAAGGATGGTAGAGTGAAGGATGATGGATTTATATACATGGTACTTGAATATGGGGAAATTGATTTGGCTCATATGTTGTCTCAGAAGTGGAAGGAACTGGATGGGTGCAACCAAACCATAGATGAAAACTGGCTTCGGTTTTACTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAGGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAATTTCCTCCTTGTCAAAGGTTCCCTAAAATTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGATACAACAAACATCCAGCGGGATTCACAGGTTGGCACTCTAAATTATATGTCACCAGAGGCATTTATGTGCAATGAGAGTGATGCGAATGGGAACATCATAAAGTGTGGTCGGCCATCAGACATCTGGTCTTTAGGATGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCCGATTACAAGACATTTTGGGCCAAAGTCAAAGTCATAACTGATCCAAATCATCAAATTACGTACGAACCGGTTTCAAATCCATGTCTTGTGGATCTAATGAAGAGATGTCTTGCATGGGATCGCAATGAAAGGTGGAGAATTCCTCAGTTACTCCAGCATCCTTTTCTTGCTCCTCCAGTTTCATCTCATCCTTCTTTGTCCCAAGATCATTCCTTTAAATGGCTGCAAGTTATTGCCGAAACCTGTAAATGTGACCGAGAAGCAGTGCAGCTTTGTAGTCAGCTCCAACAGGTGCTTGGTGACCCCTTTTCTTTAATAACTTCCGACACTTCAAATTCACGAGACGGACAGTGTAAGTTGCTGTCCCGCATATCAGAAGTCTGTGTTCAGCTGCATGAACGATTAACGAATTCGGATAATAAATAA 2199 0.4116 MDGNPKSNPSHLPNPSSSELLRQFQVALKRRRNPGGALQSNIIRPKRSAVAEAKAMSKSEDSQTSLDQSGNHSLKGSAVVAGEGFSDVKVCELENISSHLSSLALTEMDLASGVTEASTRINQDMKYRTSQQAESEKSLISKGGKISMLPRRTLISQDHSDKFKNFLSQPATQSSIVGPSCATTTSVHSSSAPMLNSLTGSSHSHPNSASNLVANRCGNLNPHQITHGVVNSVKETNITSTDQATTGVQACSSLTDAELTFKERNSCKEQQGCALKETIISNNASCYDDALSKGKESAVATNTQPEAPTVSSDVKLESSKLGKPDKAASSKGPSGSRKRTYDPDYFFKVSGKLYQRLGRIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKSNIIQLIDYEVTDKALLEGVLSGSFNNKDGRVKDDGFIYMVLEYGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKVKVITDPNHQITYEPVSNPCLVDLMKRCLAWDRNERWRIPQLLQHPFLAPPVSSHPSLSQDHSFKWLQVIAETCKCDREAVQLCSQLQQVLGDPFSLITSDTSNSRDGQCKLLSRISEVCVQLHERLTNSDNK* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2071 732 MobiDBLite consensus disorder prediction 297 339 - -
Mtr5g2071 732 SUPERFAMILY Protein kinase-like (PK-like) 349 655 IPR011009 -
Mtr5g2071 732 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g2071 732 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Mtr5g2071 732 MobiDBLite consensus disorder prediction 57 72 - -
Mtr5g2071 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Mtr5g2071 732 SMART serkin_6 354 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2071 732 Gene3D Transferase(Phosphotransferase) domain 1 469 653 - -
Mtr5g2071 732 MobiDBLite consensus disorder prediction 29 72 - -
Mtr5g2071 732 Gene3D Phosphorylase Kinase; domain 1 347 432 - -
Mtr5g2071 732 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 13 700 IPR027084 GO:0004712|GO:0007093|GO:0051304
Mtr5g2071 732 Pfam Protein kinase domain 354 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2071 732 ProSiteProfiles Protein kinase domain profile. 354 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2071 732 CDD PKc_Mps1 352 647 - -
Mtr5g2071 732 MobiDBLite consensus disorder prediction 297 316 - -
Mtr5g2071 732 PANTHER MIXED LINEAGE PROTEIN KINASE 13 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2071 Mtr-Chr5 26196216 26202514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2071 360 647 MAP Kinase Kinase Kinase AT4G08470 30.137 1.17e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Mtr5g2071 Pkinase 1.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2071 K08866 - gmx:100795003 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g2071 5 26196216 26202514 Mtr5g2071 5 26196216 26202514 ECH