Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2052 ATGGTTGAAGCGCCTGAGATGGAAAAGATGTTATTGATGAGCAAACTATTCCAACTTGGAGGCCCCGACTTTGATGTACCATTGGGAAGAAGTGACAGTATAACCTTCAATGTAACTGCACCAGACAATCTTCCTGTACCATTTGAAGGAACCGATGAACAATTAAGACTTTTTCAATCTAGAAAATTTGATGCTACAGATTTAGTTGCTCTATCTGGGGAACACACTTTTGGTCGATCCCATTGTCCTATAACCATTGATACAAACCCACCAATAGACCCAAATTTCAAAAAACAACTCGAAGCGACATGTCCGAATGACCAATCACTGAACACAATTAACTTGGATATTACAAGACGAACGAAGTTCGATAACATGTACTATATTAATCTCTTGAACCACCAGGGTGTGTTTCCATCTGATCAAGATTTGGCAAGTCATCCTACGACTAAGGAGATTGTGAACCTCTTTGCTTCCAACCAGAATGAGTTTTCTAATAAATTTGCTAATGCTTTTGTTAAAGTTAGCCAATTGAGTGTTTTGATTGGAAATCAAGGAGAAATTCGAAAGTCATGCTTTGCTCCAAGTAATCGGCAATCTAATATGGCGTATGTGGTCGAAGAGGTGGAGGAAATTGCAGCAAACATATAA 651 0.3871 MVEAPEMEKMLLMSKLFQLGGPDFDVPLGRSDSITFNVTAPDNLPVPFEGTDEQLRLFQSRKFDATDLVALSGEHTFGRSHCPITIDTNPPIDPNFKKQLEATCPNDQSLNTINLDITRRTKFDNMYYINLLNHQGVFPSDQDLASHPTTKEIVNLFASNQNEFSNKFANAFVKVSQLSVLIGNQGEIRKSCFAPSNRQSNMAYVVEEVEEIAANI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2052 216 Pfam Peroxidase 18 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Plant peroxidase signature 20 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Plant peroxidase signature 66 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Plant peroxidase signature 130 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Plant peroxidase signature 170 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 SUPERFAMILY Heme-dependent peroxidases 17 194 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PANTHER PEROXIDASE 25-RELATED 17 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Haem peroxidase superfamily signature 20 32 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Haem peroxidase superfamily signature 67 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 ProSiteProfiles Plant heme peroxidase family profile. 1 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr5g2052 216 Gene3D Peroxidase, domain 2 45 175 - -
Mtr5g2052 216 PANTHER PEROXIDASE FAMILY PROTEIN 17 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2052 Mtr-Chr5 25811822 25813805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2052 20 216 Peroxidase AT1G71695 44.608 1.58e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2052 K00430 - gmx:100795412 236.113