Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2050 ATGCTTTCTCTGCTTTTAGTTTCTTTCTATACTGAGTCATTTTTAGTTCTTCTCTCCAGGTGTATTTGCAATATGCAGAAAGTCCTGCAATGGATTGTGATTATTATTATTATCATTATAAATGGCAATGCCGCGACAAACGATAAACGAGCTGATAGGAAACTTGTTACAGATTCAGATTCAGGTGTGATAAGCATTGATTGTGGGGTAGATGAAAGTTACACTGATAACACAAACAATTTTCCATATCAAGCCGATGATATCGCCGTCATCCGGTTTGGTCAAACCAGAAATATATCATCAGATTATGAACATTCCAATCCAGGGCAGATTAATAAGCAATTGAAGTCATTGAGAAGTTTTCCAGACGGGAAGAGAAATTGTTATAACTTAAAACCTAAACAGGGAAAGAACCACAAATATAGTATAAGGGCTTATTTTGAATATGGAAACTATGACAACAAAAATAAAGTACCAATTTTCGATCAGCATCTTGGAGTCAATCTTTGGAGGCACATACAACTGATTAAAGTTAACAGCATTCTACGTTCCGAGGTTATTCATATCAGCTCAACAGACACAATCGAATATTGTCTTGTAAATACCAATCAAGGGGTACCTTTCGTTTCATTATTGGAACTATGGCCTTTAGGTGATTTTAATGTTTATCAACCGTCATTAACTTTATTGACTCTAGATCTCAAGGGACGAATCAACCTTGGCGGGTCTAAATTTGACTTCATCAGGTACACGGACGACATATTTGGTAGGTCTTGGTTGAACAGAAAAATATATGATATGAATCCAAAGAAGACATCATTATCTATTAATTTGGATACACTTGATAACACTTACAAGCTTCCAATCGAGGTTTTGAACTGTGCAGTTGAGGCGGTAAACCTGTCCAGTTCTTTGGAATTCATGTTTAATCACAGCAAAGATGAAGAGTATTATGTGTATCTTCATTTTTTTGACTTCTTGTCTAATAGTAACCAGAAAAGGATAATGAATATTTCTATCAATGGTCCTGATGGGGTCACAGAACCCCCTCTCACTCTTGAATACCGGAAGCCAACCACCATAGTTATGAATATTGAAAAAGGAAACGGCATTGATAATATTTCAATTGAAGCAACCTCTGATTCTGATTTACCTGCCATGCTCAATGCCTTTGAGATTTTCAGGGTAATACCTGAGACCTTTTTAGCCACGCAACAAGCCGATGTTGATGCCATCTGGTATATCAGAGACATTTACAATATCTCCAGAATAGATTGGCAAGGTGACCCATGTGGACCAACAGGTTTTAGATGGGAAGGTCTCACTTGCAGCGGTGAGAATAATCCAAGAATAATTTCACTAAACTTGAGCTCAAGCAAATTGTCAGGCCGGATAGATGCTGCATTCTCTAAACTCACAAATTTAGAGATTCTAGATTTGTCAAACAATGAACTGACCGGGGACCTGCCAGAATTTTTAGCACAATTACCGCGTTTGAAAATCCTTAATTTGTCACGGAATAATCTCACAGGTCTCATTCCCGAGTCTCTAAAGGAGAAGTCACATACTTCTTTGAAATTGAGTTTGGATGGAAACCTTGGTCTTTGTCAGACAGGCTCATGCAAAAGCAATAAAAAAAAATGGAATGTTAAACTGATTGTATCAATAGCAGCAACAGTTGCAGTCCTCATAATAGTTTCCGTTGTTGTGTTGATCTTCAGAACTAGAGGTCCAGGCCCGGCTATGTTTCCAAAGTCAAATATGGATGAGCAGCTAAACACGAAATGTCGTGCATTTTCTTATTCGGAGGTTGTTAGTATGACTGATGATTTCAGACAAATGATTGGAAAAGGTGGATTTGGGAAGGTTTATCTAGGTTTAATACCTGATGGTGAAAATGTTGCCGTGAAGACACTCTCTTTATCAGAATTGCAAGGGCATAAGGAGTTTATATCAGAGGTAAATTTATTGATGCCTGCTCATCATAGAAATGTCGTTTCTCTTGTTGGTTATTGTGCGGATGGTGGAATTAGAGCACTTATTTTTGAATATCTACCAGGCGGGAACCTTCAGCAACGGTTATCAGATAAAAACCCAAATGTTTTGGAATGGAATGAGAGACTTCAAATTGCATTTGATGTAGCAAATGGTTTAGAGTATCTGCATAATGGATGCAAGCCAGCTATAATCCACAGAGATTTGAAACCTCCTAACATCTTGCTAGATGAAAACACGCGTGCAAAGATTTCAGACTTCGGATTGTCTAGAGCTTTCGCAAATGACAGTGACACTCATATCCTAACTAATTGCTTTGCTGGTTCACATGGTTACATTGATCCTGAATTTCAGAACACAGGAATTCTCAATAAAAAGAGTGATGTCTATAGTTTGGGAGTAGTTTTGCTGGAGCTAGTTACAGGTCAACCAGCGTTAATTGGAACACCAAACAATTATATTCACATACTACCATGGGTTAATCGAAAACTTGAAATAGGAGATGTTCAAGGAATAGTTGATCCAAGGTTACAAGGTGAATACAATAGAGATTCGGCTTGGAAACTCATTGAGACAGCCATGTCTTGCCTTTCCCAGTTTGCAACACAGAGGCCTGACATAAAAGAGATTGTCTCAGAGCTAAAGGATTGTTTGTCTCTAGTAATGCCTATTGAAAGGAGTGCAAGCCAAAGGAGAAGTTTATCAGTCAAGGGCTCTATGCAGATTGAAATCAATGAATCAGATATATGTGGTCCAAATCCTAGGTAG 2763 0.38 MLSLLLVSFYTESFLVLLSRCICNMQKVLQWIVIIIIIIINGNAATNDKRADRKLVTDSDSGVISIDCGVDESYTDNTNNFPYQADDIAVIRFGQTRNISSDYEHSNPGQINKQLKSLRSFPDGKRNCYNLKPKQGKNHKYSIRAYFEYGNYDNKNKVPIFDQHLGVNLWRHIQLIKVNSILRSEVIHISSTDTIEYCLVNTNQGVPFVSLLELWPLGDFNVYQPSLTLLTLDLKGRINLGGSKFDFIRYTDDIFGRSWLNRKIYDMNPKKTSLSINLDTLDNTYKLPIEVLNCAVEAVNLSSSLEFMFNHSKDEEYYVYLHFFDFLSNSNQKRIMNISINGPDGVTEPPLTLEYRKPTTIVMNIEKGNGIDNISIEATSDSDLPAMLNAFEIFRVIPETFLATQQADVDAIWYIRDIYNISRIDWQGDPCGPTGFRWEGLTCSGENNPRIISLNLSSSKLSGRIDAAFSKLTNLEILDLSNNELTGDLPEFLAQLPRLKILNLSRNNLTGLIPESLKEKSHTSLKLSLDGNLGLCQTGSCKSNKKKWNVKLIVSIAATVAVLIIVSVVVLIFRTRGPGPAMFPKSNMDEQLNTKCRAFSYSEVVSMTDDFRQMIGKGGFGKVYLGLIPDGENVAVKTLSLSELQGHKEFISEVNLLMPAHHRNVVSLVGYCADGGIRALIFEYLPGGNLQQRLSDKNPNVLEWNERLQIAFDVANGLEYLHNGCKPAIIHRDLKPPNILLDENTRAKISDFGLSRAFANDSDTHILTNCFAGSHGYIDPEFQNTGILNKKSDVYSLGVVLLELVTGQPALIGTPNNYIHILPWVNRKLEIGDVQGIVDPRLQGEYNRDSAWKLIETAMSCLSQFATQRPDIKEIVSELKDCLSLVMPIERSASQRRSLSVKGSMQIEINESDICGPNPR* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2050 920 Pfam Malectin-like domain 66 396 IPR024788 -
Mtr5g2050 920 PRINTS Leucine-rich repeat signature 475 488 - -
Mtr5g2050 920 PRINTS Leucine-rich repeat signature 496 509 - -
Mtr5g2050 920 PANTHER OS07G0107800 PROTEIN-RELATED 57 898 - -
Mtr5g2050 920 SMART serkin_6 609 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2050 920 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 57 898 - -
Mtr5g2050 920 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Mtr5g2050 920 SUPERFAMILY L domain-like 434 519 - -
Mtr5g2050 920 Gene3D - 235 396 - -
Mtr5g2050 920 Pfam Protein tyrosine and serine/threonine kinase 611 879 IPR001245 GO:0004672|GO:0006468
Mtr5g2050 920 SUPERFAMILY Protein kinase-like (PK-like) 590 879 IPR011009 -
Mtr5g2050 920 SMART LRR_typ_2 496 519 IPR003591 -
Mtr5g2050 920 SMART LRR_typ_2 472 495 IPR003591 -
Mtr5g2050 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Mtr5g2050 920 Gene3D Transferase(Phosphotransferase) domain 1 685 896 - -
Mtr5g2050 920 ProSiteProfiles Leucine-rich repeat profile. 474 496 IPR001611 GO:0005515
Mtr5g2050 920 CDD STKc_IRAK 615 880 - -
Mtr5g2050 920 Gene3D Ribonuclease Inhibitor 418 530 IPR032675 -
Mtr5g2050 920 Pfam Leucine rich repeat 453 509 IPR001611 GO:0005515
Mtr5g2050 920 Gene3D Phosphorylase Kinase; domain 1 583 684 - -
Mtr5g2050 920 ProSiteProfiles Protein kinase domain profile. 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2050 Mtr-Chr5 25790797 25802341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2050 61 884 Receptor kinase-like Gene Family AT2G19210 42.417 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mtr5g2050 Malectin_like 4.7e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2050 - - vun:114194066 930.628