Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2046 ATGGGAGAAAGAAGAGGGAACGAGAGAAGAGGGAACACAGAGCATGTGGGTTGTTTGTTTCTGTTCTTCTTCTTCTCCGATTGCTATCAATTACCCCAACTGATCAATTGCTATCAATTATTATCCTCAGTGGACAAGTGTAGCTCCTTAACATACATAGACACTGACGGTAATTGGCACCGAGTAAGCAAGGGAGCACCGGAGGAGTCTCGGACTGTTGTGGCAGAGAATTTACCTGACGATCATTCCCATCAAAATCTTCAGAAAATATTTGCCATAGTCGAGAGCGTCAAAACAATCAGAATATGCCATCCCCAAGAACCAAATTCTTCTCGGCCGAAAGGTGATTTTCTCATCAGTAACAAGGAATGTGTGGATGCAGCAGATGGAAAACCAACAGATGAAAATGTGGACTTTACCTGTCTATTGAAAATGCTGATGCTGATCTTAGAACTTTGCCTTTCAGCAATCTGA 474 0.4262 MGERRGNERRGNTEHVGCLFLFFFFSDCYQLPQLINCYQLLSSVDKCSSLTYIDTDGNWHRVSKGAPEESRTVVAENLPDDHSHQNLQKIFAIVESVKTIRICHPQEPNSSRPKGDFLISNKECVDAADGKPTDENVDFTCLLKMLMLILELCLSAI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2046 157 PANTHER LUPUS LA PROTEIN-RELATED 70 122 IPR045180 -
Mtr5g2046 157 PANTHER LA-RELATED PROTEIN 6C 70 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2046 Mtr-Chr5 25715770 25720617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2046 41 69 Primary Pumps ATPases AT2G18960 72.414 2.26e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2046 K15191 - mtr:MTR_8g071890 182.57