Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2036 ATGGAATTCTCTAACCAATTCAAAGAATCATTTAAGCATGGTCTTATTGCTGGGTATTGTTTTACTGCAACTTTTGTCATAGTTTTTTATATGTTCTATTGCCTACCCGCACAAGTTATCAAGAATAGAAAAAATAAGAAAGTTGGACATATGAAAACAGAAGAGAAGCACAAATTGCCTTGCCAGAAATTTAAACAGCAAAAGATCAACAAGAAACTAAAGAAAGTTAGACAAAAAGACAGAGTGTTTCCTATGGAGTTGATAGAGAAAAGCATACAGATCAGTAAAGTTGGACGATTGACTTATAGAATGAACTTCACAAAACTTTGTCATGCAACCAAATATTTTAGCTTGGACAATGTCATTGGTGTTGGAGTAATCGGAATAATGTACAAGGCAGCTCTTCCGAACGGTCGTTTCTTGGCGGTTAAGAGACTATATGATTCTCAATCAATTATCAAAAGGTTTGAGTTAGAAATAATGATTTTGGGACAATACAGTCATAGAAACATAGTTTCATTGATTGGTTTTAGCATAGAAGAAGGAAACAATGAAAGAATTTTGGTGTATCAATACATGTCAAATGGAAGGCTATCTGATAAGCTGAAAGAAACTAAAAAATTAGAATGGTCAAAGGTTATTAAAATTGCACTTGGTGTAGCAAGAGGCTTATGTTGCCTCCATCATAGCTTGCATATGCTCCATCTCAATATAAATTCTGACTGTATCTTGTTAGGGAAAAATTTTGAGCCAAAGATATCCAATTTCGGAGGGATCATGTTTATGAATAATGATCTGGAAAAAAACATAGGACTTGAGAAGAAGGATGTTTCTGACTTTGGTTGTTTGCTTTTTGAGCTGATTAATGGGAATAAATTTGGGGAAATACATGAATCTTTTAACAATGTTACAGTTCCTTTTGTGACTTATCCGAATCATGTGAATATGTTGGGAGAAGACCCTTCTGGATTCTGTGATGCAGTGGATGAATATCTAAACAAGATAGAATTTAAAGATGAGGAGGTATCTACTCTTCTTAGAGTTGCACGTGAATGTGTTCATCCTTTGTTTGAACAAAGGCCTACTATGCTTGAGGTGTATAACAAGATATGCAACATAGGGGAAAGAGATAGAATTTGTGAAGATGCTAACCTCTTGTCTATGGATTTTGTTACTCCTATTGAAGTAGACACCAATATGCCTAGCTAA 1209 0.3449 MEFSNQFKESFKHGLIAGYCFTATFVIVFYMFYCLPAQVIKNRKNKKVGHMKTEEKHKLPCQKFKQQKINKKLKKVRQKDRVFPMELIEKSIQISKVGRLTYRMNFTKLCHATKYFSLDNVIGVGVIGIMYKAALPNGRFLAVKRLYDSQSIIKRFELEIMILGQYSHRNIVSLIGFSIEEGNNERILVYQYMSNGRLSDKLKETKKLEWSKVIKIALGVARGLCCLHHSLHMLHLNINSDCILLGKNFEPKISNFGGIMFMNNDLEKNIGLEKKDVSDFGCLLFELINGNKFGEIHESFNNVTVPFVTYPNHVNMLGEDPSGFCDAVDEYLNKIEFKDEEVSTLLRVARECVHPLFEQRPTMLEVYNKICNIGERDRICEDANLLSMDFVTPIEVDTNMPS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2036 402 ProSiteProfiles Protein kinase domain profile. 116 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g2036 402 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 4 377 - -
Mtr5g2036 402 PANTHER RECEPTOR-LIKE PROTEIN 55 4 377 - -
Mtr5g2036 402 SUPERFAMILY Protein kinase-like (PK-like) 99 368 IPR011009 -
Mtr5g2036 402 Gene3D Phosphorylase Kinase; domain 1 75 192 - -
Mtr5g2036 402 Pfam Protein tyrosine and serine/threonine kinase 118 367 IPR001245 GO:0004672|GO:0006468
Mtr5g2036 402 Gene3D Transferase(Phosphotransferase) domain 1 271 383 - -
Mtr5g2036 402 Gene3D Transferase(Phosphotransferase) domain 1 193 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2036 Mtr-Chr5 25596064 25603267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2036 16 373 Receptor kinase-like Gene Family AT5G07280 29.156 1.22e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mtr5g2036 PK_Tyr_Ser-Thr 2.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2036 - - mtr:MTR_5g057660 625.55