Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2022 ATGGAAAGTCCAAAATCAAATGCCGAAGAAGATAGTCATAACATGGAGGGCATAGAGTGCAATGAAAATTCTCAAGAAAGAAGAAACCCTGAGCATGACTTAGATGTTCATGAGCATCAAAATATTGATCCTTGTATTGATATGGAATTTGACTCTCTTGATGATGTTAAAAATTTATACACATCATTTGCTAAAAAAGAAGGTTTTGGAATTCGTACACGTTCAACTAAGACAAATTTATGCATATTTGTTTGCTCTAATGCTGGCCAACATGTTGATAGTAATGACAAAGAAGAAAGCAATACAATCACAGTAAAAAGCAAAAAAAGATGTTCAACATCAAGAACTGATTATAAGGCAACACTGGTAGTCTCAAAAGCAAAAATGAGGCCCAAATGGACTATCATTACATTTAACAATACTCATAATCATGCAATAGTTAGCCCCAAGAGTATAAACTATCTTAGGTGCCATAAAAAAATGGGTGGGACAGCAAAGAATCTAGTTGAACAGTTTGATCAAGAGGGCTTGCCTACCAGAAAAGTCGCTACAATGTTTAGCAATGAAGGTTCGGCTTTCTCTAATAGAGATTGTTGGAATCATCTTAGAGATCTCCGATCTAAAAATCTGGATGTTGGAGATGCTCAAGCAGTGTTAAACTTTTGTAAGCAAAAACAAGCAGAGAACCCAAATTTCTTTTATGCGATTCAAGTTGATAATCATGATAGAATGATTAATTTTTTTTGGGTTGATGCAAGGTCGAGGTTGGCCTATAATTATTTTGGAGATGTTGTTACATTTGATACAACATATAAGAAGAACAAGTATCTTATGCCATTTGCGCCATTTACTGGATTGAATCATCATCATCAGTCCATTTTATTCGGTTGTGCTTTGTTGCAAGATGAAACAGAGAAGTCTTTTACATGGTTGTTTGAAACTTGGCTAATGGCAATGGGTGGAAAAAGTCATGTATCAATAATTACAGATCAAGATAAGGCAATGTGCGGAGCAATATCTAAGCAACAAGTCGAAGGTGTTCTTCGCGGAACGAAGATGGTGAAATTTGTGATTTCACCTGAGATTCCACCGGTTTATCTCATAAATGCAGCACGTGGAGCAGGAACGGAGAATCCTGTTTACACTGAATGGGAAGAACACGATTAA 1167 0.3608 MESPKSNAEEDSHNMEGIECNENSQERRNPEHDLDVHEHQNIDPCIDMEFDSLDDVKNLYTSFAKKEGFGIRTRSTKTNLCIFVCSNAGQHVDSNDKEESNTITVKSKKRCSTSRTDYKATLVVSKAKMRPKWTIITFNNTHNHAIVSPKSINYLRCHKKMGGTAKNLVEQFDQEGLPTRKVATMFSNEGSAFSNRDCWNHLRDLRSKNLDVGDAQAVLNFCKQKQAENPNFFYAIQVDNHDRMINFFWVDARSRLAYNYFGDVVTFDTTYKKNKYLMPFAPFTGLNHHHQSILFGCALLQDETEKSFTWLFETWLMAMGGKSHVSIITDQDKAMCGAISKQQVEGVLRGTKMVKFVISPEIPPVYLINAARGAGTENPVYTEWEEHD* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2022 388 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 341 IPR031052 GO:0006355
Mtr5g2022 388 MobiDBLite consensus disorder prediction 1 31 - -
Mtr5g2022 388 Pfam MULE transposase domain 264 341 IPR018289 -
Mtr5g2022 388 Pfam FAR1 DNA-binding domain 59 147 IPR004330 -
Mtr5g2022 388 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 38 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2022 Mtr-Chr5 25245752 25247664 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g2022 FAR1 2.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2022 - - qsu:111998351 380.948