Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2010 ATGACAGGTGTTTGGCCAGAATCTAAGAGTTTTAATGATGAAGGATATGGTCCAATCCCTAAAAAGTGGCATGGAACTTGTCAAACTGCTAAAGGGAATCCAGATAACTTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTAACAAAGGCTATCTGGCAATGCCAATTCCTATTAGAGACCCAAATGAAACATTCAATAGTGCACGTGACTTTGATGGTCATGGTTCACATACTTTATCAACTGTTGGAGGAAATTTCGTTGCTAATGCGAGTGTATTTGGCAATGGCCGAGGAACAGCAAGTGGTGGATCACCAAAAGCTCGAGTTGCAGCCTATAAGGTTTGCTGGGGGGATTTATGTCATGATGCAGATATTTTGGCTGGTTTTGAAGCTGCAATAAGTGATGGTGTTGATGTACTTTCAGTGTCTTTGGGTAGAAATTTTCCTGTTGAATTTCACAATAGCAGTATTTCCATAGGGTCTTTCCATGCAGTTGCCAACAACATCATTGTTGTGTCTGGTGGAGGAAATTCAGGACCTGATCCTAGTACTGTATCCAACTTGGAACCTTGGACACTTACAGTTGCTGCAAGCACAATTGATCGAGATTTCACAAGCTATGTTATTCTTGGTAACAAGAAAATACTCAAGGGAAAGAGCCTTTCAGAGCATGAACTACCGCGGCATAAGTTGTATCCATTGATTAGTGCTGCTGATGCCAAATTTGATCATGTGTCAACGGTAGAAGCCCTCTTGTGCATTAATGGATCTCTTGATTCTCATAAAGCAAAGGGAAAAATATTGGTATGTCTTCGAGGTAACAATGGTAGAGTTAAAAAGGGTGTAGAAGCTTCTCGAGTAGGTGCTGTTGGAATGATTTTGGCTAATGACGAGGCTTCAGGCGGTGAAATTATATCTGACGCTCATGTGCTTCCCGCTTCACATGTTAACTTTAAAGATGGAAACGTCATTTTAAAATATGTCAATTACACCAAGTCTCCTATAGCTTATATTACTAGAGTTAAAACACAATTGGGTGTAAAGGCATCTCCATCTATAGCTGCATTTTCATCAAGAGGACCAAATATCCTTGCCCCTTCAATCCTTAAGCCTGACATCACTGCACCAGGAGTCAAAATAATTGCAGCTTATAGTGAAGCTTTACCTCGTTCACCAAGTGAATCTGATAAGCGAAGAACTCCTTTTAATATTATGTCAGGCACTTCGATGGCATGTCCTCATGTTGCTGGACTTGTTGCGCTGCTCAAATCTGTCCATCCTGATTGGAGTCCAGCTGTTATCAAGTCAGCAATCATGACTACAGCAACAACAAAAGACAACATCGGAGGTCATTTGTTGGATTCATCGCAAGAAGAAGCAACTCCTAATGCATATGGTGCAGGGCACGTTCGACCTAATCTTGCAGCAGATCCTGGACTTGTGTATGACCTAAATATAACTGATTATTTGAACTTTTTATGTGGTCATGGATACAACAACTCCCAACTTAAATTGTTCTATGGAAGACCTTACACTTGTCCCAAATCCTTCAATTTAATTGATTTCAATTATCCAGCCATCATAGTTCCGAACTTTAAAATTGGACAGCCTTTGAACGTTACTCGTACTGTAACCAATGTCGGGTCTCCAAGCAGGTATAGAGTGCATATCCAAGCACCCACAGGATTTCTAGTTTCAGTGAAGCCTAACAGACTAAATTTTAAGAAAAATGGTGAAAAAAGAGAGTTCAAGGTTACATTAACCTTGAAGAAAGGAACTACATATAAGACTGATTACGTCTTTGGAAAATTGATTTGGACCGATGGAAAACATCAAGTTGCGACTCCTATTGCAATAAAGTATCCACATTAG 1878 0.4004 MTGVWPESKSFNDEGYGPIPKKWHGTCQTAKGNPDNFHCNRKLIGARYFNKGYLAMPIPIRDPNETFNSARDFDGHGSHTLSTVGGNFVANASVFGNGRGTASGGSPKARVAAYKVCWGDLCHDADILAGFEAAISDGVDVLSVSLGRNFPVEFHNSSISIGSFHAVANNIIVVSGGGNSGPDPSTVSNLEPWTLTVAASTIDRDFTSYVILGNKKILKGKSLSEHELPRHKLYPLISAADAKFDHVSTVEALLCINGSLDSHKAKGKILVCLRGNNGRVKKGVEASRVGAVGMILANDEASGGEIISDAHVLPASHVNFKDGNVILKYVNYTKSPIAYITRVKTQLGVKASPSIAAFSSRGPNILAPSILKPDITAPGVKIIAAYSEALPRSPSESDKRRTPFNIMSGTSMACPHVAGLVALLKSVHPDWSPAVIKSAIMTTATTKDNIGGHLLDSSQEEATPNAYGAGHVRPNLAADPGLVYDLNITDYLNFLCGHGYNNSQLKLFYGRPYTCPKSFNLIDFNYPAIIVPNFKIGQPLNVTRTVTNVGSPSRYRVHIQAPTGFLVSVKPNRLNFKKNGEKREFKVTLTLKKGTTYKTDYVFGKLIWTDGKHQVATPIAIKYPH* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2010 625 CDD PA_subtilisin_like 209 340 - -
Mtr5g2010 625 CDD Peptidases_S8_3 2 445 IPR034197 -
Mtr5g2010 625 Pfam PA domain 263 325 IPR003137 -
Mtr5g2010 625 Gene3D Peptidase S8/S53 domain 2 491 IPR036852 GO:0004252|GO:0006508
Mtr5g2010 625 Pfam Subtilase family 64 470 IPR000209 GO:0006508|GO:0008236
Mtr5g2010 625 Gene3D - 495 623 - -
Mtr5g2010 625 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 2 621 - -
Mtr5g2010 625 PRINTS Subtilisin serine protease family (S8) signature 72 85 IPR015500 -
Mtr5g2010 625 PRINTS Subtilisin serine protease family (S8) signature 408 424 IPR015500 -
Mtr5g2010 625 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 621 IPR045051 -
Mtr5g2010 625 ProSitePatterns Serine proteases, subtilase family, serine active site. 409 419 IPR023828 -
Mtr5g2010 625 Pfam Fibronectin type-III domain 523 621 IPR041469 -
Mtr5g2010 625 Gene3D - 203 347 - -
Mtr5g2010 625 ProSiteProfiles Serine proteases, subtilase domain profile. 1 478 - -
Mtr5g2010 625 SUPERFAMILY PA domain 262 331 IPR046450 -
Mtr5g2010 625 SUPERFAMILY Subtilisin-like 33 482 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2010 Mtr-Chr5 25081372 25084309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g2010 2 622 Subtilisin-like Serine Gene Family AT2G04160 55.662 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2010 - - ccaj:109807044 824.698