Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1998 ATGGCACAACCACCTTCTCCTTCCACCATCTTCACACTAACCTTCTTCCACTTCCTCCTCTTCACTCACGCCACAAAAAACCCAGATTTCCACTCACTACTTGCATTCAAAACAACCACCGACACATCCAACAAACTCACCACATGGAACATCACCACAAACCTATGCACATGGTACGGTGTCTCTTGTCTAAGAAACCGTGTCTCCCGCCTTGTCCTCGAAAACCTCGACCTCCACGGCTCGATGGAACCGTTAACCGCACTTACTCAGCTCCGTGTACTCAGCCTTAAACGCAACCGTTTCAACGGTCCCATTCCAAATCTCTCCAACTTAACTTCACTAAGACTTTTGTTCCTTTCTTACAACAATTTCTCCGGTGAGTTTCCCGAAAGTTTAACCTCGTTAACCCGTCTCTACCGGCTTGATCTCGCTGATAACAATCTCTCTGGTGAGATTCCGGTGAATGTCAACCGTTTGTCTAGTCTCCTCACTCTCAAACTCGATGGAAATCAAATCCATGGACACATTCCAAATATAAACCTGTCTTACCTCCAAGACTTCAATGTCTCTGGTAACAACCTCTCTGGTAGAGTACCTGAATTACTTTCGGGTTTTCCTGATTCATCTTTTGCTCAAAACCCGTCTTTATGTGGTGCTCCATTGCAAAAATGTAAAGACGTTCCTGCCCTTGCTTCATCGTTGGTTCCATCTTCTTCAAGTATAATGTCGAGAAACAAGACTCATAGAAATGGTGGTCCAAGAATGGGGACTTTGGTTTTAATCGCCATTATCCTCGGCGATGTATTAGTACTCGCAGTTGTCTCATTGCTTCTCTACTGCTACTTCTGGAGAAACCATGCAAACAAAACGAAGGAAAGAAAAGAAGAAGAATCAAATTCGAAGAATGTTGAAGGTGAAAATCAAAAGATGGTTTATATTGGGCAACAAGGGTTAGAGAAAGGTAATAAAATGGTGTTTTTCGAAGGGGTGAAGAGGTTTGAGCTAGAGGATTTGCTTCGTGCTTCGGCGGAAATGTTGGGGAAGGGTACCTTAGGAACTGTCTATAAAGCTGTTCTTGATGATGGAAGTGTTGTAGCTGTGAAGAGGTTGAAGGAGATTAATATTAGTGGGAAGAAAGAGTTCGAGCAGAGAATGGAAATTCTTGGAAAGTTAAAACACTCCAACATTGTTAGCTTAAAGGCTTATTATTTTGCAAGGGATGAAAAATTGCTTGTCTTTGATTACATGGTTAATGGTAGCTTGTTTTGGCTTCTTCATGGTAACCGAGGACCCGGACGAACCCCACTTGACTGGACCACAAGACTAAAGATAGCAACCCAAACAGCAAAAGGTATAGCATTCATCCACAACAATAATCTCACCCATGGTAACATCAAATCCACCAACATCCTCATCAACGTCTCTGGAAACACCCACGTGGCAGATTTTGGACTCTCCATTTTCACCCTCCCATCAAAAACAAGATCCAACGGCTACCGTGCTCCAGAAACATCATTAGACGGTCGAAAAAACTCTCAAAAATCTGATGTCTACGCCTTTGGAGTTTTACTAATGGAGATACTAACAGGGAAGTCCCCCTCCTCCGCCGCAGACAGCGGAGCAGGGGTTGAACTTCCTAAGTGGGTCCAGTCAGTCGTTAGGGAGCAATGGACTGCTGAGGTGTTTGATCTTGAGCTGATGAGGTATAAGGATGCTGAGGAGGAGATGGTGGCATTGTTAAAAATTGCGATGACGTGTACTGTGACCGTACCTGATCAACGACCTAAGATGAGCCACGTGGTTAAGAAGATTGAGGAGTTGTGTGATGTGTCCATGTGTCATGACTCGGTTTGTGAGTCACCTTCAATGTCTGAAGATGCATGTGGAGGTGCTATTAACTAA 1902 0.4401 MAQPPSPSTIFTLTFFHFLLFTHATKNPDFHSLLAFKTTTDTSNKLTTWNITTNLCTWYGVSCLRNRVSRLVLENLDLHGSMEPLTALTQLRVLSLKRNRFNGPIPNLSNLTSLRLLFLSYNNFSGEFPESLTSLTRLYRLDLADNNLSGEIPVNVNRLSSLLTLKLDGNQIHGHIPNINLSYLQDFNVSGNNLSGRVPELLSGFPDSSFAQNPSLCGAPLQKCKDVPALASSLVPSSSSIMSRNKTHRNGGPRMGTLVLIAIILGDVLVLAVVSLLLYCYFWRNHANKTKERKEEESNSKNVEGENQKMVYIGQQGLEKGNKMVFFEGVKRFELEDLLRASAEMLGKGTLGTVYKAVLDDGSVVAVKRLKEINISGKKEFEQRMEILGKLKHSNIVSLKAYYFARDEKLLVFDYMVNGSLFWLLHGNRGPGRTPLDWTTRLKIATQTAKGIAFIHNNNLTHGNIKSTNILINVSGNTHVADFGLSIFTLPSKTRSNGYRAPETSLDGRKNSQKSDVYAFGVLLMEILTGKSPSSAADSGAGVELPKWVQSVVREQWTAEVFDLELMRYKDAEEEMVALLKIAMTCTVTVPDQRPKMSHVVKKIEELCDVSMCHDSVCESPSMSEDACGGAIN* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1998 633 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Mtr5g1998 633 ProSiteProfiles Protein kinase domain profile. 340 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1998 633 SUPERFAMILY L domain-like 44 221 - -
Mtr5g1998 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 617 - -
Mtr5g1998 633 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Mtr5g1998 633 Pfam Protein kinase domain 343 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1998 633 Gene3D Ribonuclease Inhibitor 21 85 IPR032675 -
Mtr5g1998 633 Gene3D Transferase(Phosphotransferase) domain 1 416 619 - -
Mtr5g1998 633 Gene3D Ribonuclease Inhibitor 86 228 IPR032675 -
Mtr5g1998 633 PANTHER - 23 617 - -
Mtr5g1998 633 SUPERFAMILY Protein kinase-like (PK-like) 344 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1998 Mtr-Chr5 24878148 24882145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1998 29 630 Receptor kinase-like Gene Family AT1G68400 60.703 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr5g1998 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1998 - - adu:107467433 773.081