Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1997 ATGAGTAACAATTGCCAAAATTCTGGTACTAGTCATAATATCAGAGGTTTAATCTCCAACGCTGGTGCTGGTGCTGCTGCTGGGGCAATAGCTGCCACGTTTGTGTGTCCATTGGATGTGATCAAGACAAGGCTACAAGTTCATGGCCTTCCACCTGTGCAGAAAGGTAGTGTCATTGTCACGAGCTTGCAGAATATAGTTAGGACTGAAGGCTTCAGGGGATTGTACCGTGGCCTTTCACCAACAATACTAGCATTGCTTCCAAACTGGGCAGTTTACTTCACATGTTATGAGCAAATAAAGGGCTTGCTTCGGACACATGAGGGTTGCAACGAACTCACAACTATTGGAAATATTATAGCTGCTGCTGGAGCTGGGGCTGCAACAGCAATATCTACAAACCCATTGTGGGTTGTTAAGACAAGACTTCAAACACAAGGTATGAGGCCTAATGTAGTTCCTTACAAGAGTGTTCTCTCCGCTTTGACAAGGATTACTCATGAGGAAGGCCTACGAGGACTGTATAGTGGTATTTTGCCTTCATTAGCTGGCGTAAGTCATGTAGCAATTCAATTCCCAGCATATGAAAAGATAAAGTTATACATGGCCAAAAAAGATAACACAACTGTCGACAAGCTAAATCCTGGGAGTGTTGCAATCGCATCATCAATTTCAAAAGTAACTGCCTCTGTAATGACTTATCCACACGAGGTAATACGTTCCCGGCTGCAAGAGCAAGGCCAAGCGAAAAATAGTAGTGGAGTTCAATATGCCGGGGTTATTGACTGCACTAAAAAGGTGTTTCAAAAGGAAGGCATTAGGGGATTTTATCGCGGTTGTGCTACTAATCTATTAAGAACAACCCCTTCAGCTGTTATTACATTCACCAGTTATGAGATGATACACAGGTTTTTGACGCGAACTATACCACAAAATGAGCCTAACAAACCCAAACCAGAAGCCAGTGACATTGATATGAAAAATGGTGATGATAGGGGGGAATCACCACCCTCTCAATCTAACAAGATTCCTCTCGGAAACAAAGACCAGCTAACAAGACATTGA 1065 0.43 MSNNCQNSGTSHNIRGLISNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPVQKGSVIVTSLQNIVRTEGFRGLYRGLSPTILALLPNWAVYFTCYEQIKGLLRTHEGCNELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPNVVPYKSVLSALTRITHEEGLRGLYSGILPSLAGVSHVAIQFPAYEKIKLYMAKKDNTTVDKLNPGSVAIASSISKVTASVMTYPHEVIRSRLQEQGQAKNSSGVQYAGVIDCTKKVFQKEGIRGFYRGCATNLLRTTPSAVITFTSYEMIHRFLTRTIPQNEPNKPKPEASDIDMKNGDDRGESPPSQSNKIPLGNKDQLTRH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1997 354 MobiDBLite consensus disorder prediction 318 332 - -
Mtr5g1997 354 SUPERFAMILY Mitochondrial carrier 18 300 IPR023395 -
Mtr5g1997 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Mtr5g1997 354 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 10 313 - -
Mtr5g1997 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Mtr5g1997 354 MobiDBLite consensus disorder prediction 309 354 - -
Mtr5g1997 354 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Mtr5g1997 354 Pfam Mitochondrial carrier protein 18 106 IPR018108 -
Mtr5g1997 354 Pfam Mitochondrial carrier protein 214 306 IPR018108 -
Mtr5g1997 354 Gene3D Mitochondrial carrier domain 111 308 IPR023395 -
Mtr5g1997 354 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Mtr5g1997 354 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Mtr5g1997 354 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Mtr5g1997 354 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Mtr5g1997 354 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Mtr5g1997 354 MobiDBLite consensus disorder prediction 333 347 - -
Mtr5g1997 354 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 313 IPR044712 GO:0006862|GO:0055085
Mtr5g1997 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 304 IPR018108 -
Mtr5g1997 354 Gene3D Mitochondrial carrier domain 3 110 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1997 Mtr-Chr5 24855138 24859656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1997 33 348 Chloroplast and Mitochondria Gene Families AT1G25380 63.473 3.32e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1997 K15115 - gmx:100797064 552.747