Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1982 ATGATCACTATTTTTACCATGCTTGTATCTTTACTATCTCAAATTTCATATGCAACTGATACCATCACCCAGCCTACGTCGATTCGGGATGGCAGCAGTTTGATTTCTAAAGATGGAAGCTTTGAGTTGGGTTTTTTCAGTCCAGGTAGTTCATCAAACCGCTATGTCGGACTTTGGTACAAAAATATTCCAGTTAGAAGAGTGGTTTGGGTTCTCAACCGTGATAATCCGATCAAAGACGACTCCAGCAAGTTGACCATAAGCCAAGATGGAAATCTCATGCTTCTCAATCAAAATGAGTCTTTAGTCTGGTGGTCCACAAACATATCAACCAATGCCTCAAATCGTGTTGTGCAGCTTTTGGACAACGGTAATTTAGTTCTTAAAGATGTGATAAACAGCGACAATGGAGAAAGTTTTTTGTGGCAAGGCTTTGACTATCCCTGTGATACGTTGTTACCGGGAATGAAGATTGGAATCGACAAAAGAACAGGTCTTAATAGGCATCTCACTGCATGGAAAAATTGGGAGGATCCATCTTCCGGAGACTTAAAAAATGTTGTGGAATTTACCAGCAATCCTGAAGGCATATTTTGGAAGGGTTCAACAAAATACTATAGGACGGGACCATTGATCGGGGCTGAGTCCAGGGGATCAGTCGGATTGAGAGATAATCCAATATATGGTTTTGAATATTCCGTCAATGAAAACGAAGTGTATTATATGTTCATACTCAAGAATGCTTCTCTCATCTCTGCAGGGGTTCTAAACCAAACTCTTTCTGTTCGTCAACGCCTCCTTTGGATACCTGAATCGAGAACATGGAATGTTTATCAATCGCTGCCAATAGATAATTGCGATGTTTATAATGTTTGTGGAGCAAATGGATATTGCATCATTGAAGGATCGCAAACATGTCGATGTTTAGATGGATTTAAACCAAAATCACTTGAACTGTGGAATAGCTTGGACTGGAAACAAGGATGCGTGCGCAACGGAAATTGGAGTTGTGGGGTCAAAAATAGGGACGGATTTCGTAAATTTATTGGAATGAAATTTCCAGATACAACAAATTCTTGGATTAATGCAAACATGACACTTGATGAATGCAAAGTCAAATGCATAAATAATTGCTCTTGCACAGCATATACATCCTTAGACCCAGTTGGAGCAGGAAAGGGTTGCTCTATCTGGTTAGGTGATCTTATTGATTTAAGAATTTCACAAGACGGACAAGACCTATACGTTCGAATGGATTCGGCATATATTGATGCGAATCATGGTCCTGGAAAAAAGTTTATATTGCCAGTTTCAATCACACTTTCAATGGTTCTTGTGATTTTATTCGCATTCTCCTACTTTTGCATATACAAGGGGAAGTGTAAAGTGATAATAGACAAAATCATGATGATAAAAGAGAAAGATGAAGATGGACATGATGATTTTGAGCTTCCTATATTTGAACTAGCTACAGTACTCAAGGCGACCAATAACTTCTCAAATGATAATAAACTTGGTGAAGGTGGTTTTGGACCGGTATACAAGGGTACATTGCAAGATGGACAAGTAATTGCAGTTAAAAGACTTTCGAAAAATTCAGTACAAGGATCAATAGAATTTAAAAATGAAGTCATATTGTGCGCTAAATTGCAACATCGAAATCTTGTTAAGGTTATTGGTTGTTGCATTGAAGGAGACGAGAAAATGTTACTCTACGAGTACATGCCGAATAGAAGTCTCGATTTATTCATATTTGATCCAGTTCAAAGTAGGTTCTTAGATTGGCCTGTGCGCTTCAACATGTTGAATGCAATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTATATTAAGAATCATACATAGGGATCTAAAGGCAAGCAATATTTTAGTAGACAATGATATGAATCCAAAGATTTCAGATTTTGGCATGGCTAGAATGTGTGGAGGGGATCAAATTGAAGGGAAGACTAGTAGAATAGTCGGGACATATGGTTACATGGCACCTGAATATGTTATTCATAGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGCGTCCTATTGCTCGAAATCATAAGCGGAAGAAGAAATAGGGCACTTACCTATCATGAACATGATCACAATCTTATTTGGCATGCTTGGAGATTGTGGAGAGAGGACATTCCACATGAACTGATTGATGAATGTTTAAGAGATTCATGTATTTTACATGAAGCATTACGTTGTATTCAAGTTGGTCTTTTATGTGTGCAACATGTTCCTAATGATAGGCCAAATATGACAACTGTGGTTATGATGTTGGGTAGTGAAATTACCTTACCTCAACCAAAAGAACCTGGTTTCTTAAATCAAAGAGTCTCAATTGAAGAAACATCATCTTCTTCAAGAGAAGAAATACCTTCAATCAATGGTATAACTATCTCACGATTAAATGCCAGATAG 2451 0.3762 MITIFTMLVSLLSQISYATDTITQPTSIRDGSSLISKDGSFELGFFSPGSSSNRYVGLWYKNIPVRRVVWVLNRDNPIKDDSSKLTISQDGNLMLLNQNESLVWWSTNISTNASNRVVQLLDNGNLVLKDVINSDNGESFLWQGFDYPCDTLLPGMKIGIDKRTGLNRHLTAWKNWEDPSSGDLKNVVEFTSNPEGIFWKGSTKYYRTGPLIGAESRGSVGLRDNPIYGFEYSVNENEVYYMFILKNASLISAGVLNQTLSVRQRLLWIPESRTWNVYQSLPIDNCDVYNVCGANGYCIIEGSQTCRCLDGFKPKSLELWNSLDWKQGCVRNGNWSCGVKNRDGFRKFIGMKFPDTTNSWINANMTLDECKVKCINNCSCTAYTSLDPVGAGKGCSIWLGDLIDLRISQDGQDLYVRMDSAYIDANHGPGKKFILPVSITLSMVLVILFAFSYFCIYKGKCKVIIDKIMMIKEKDEDGHDDFELPIFELATVLKATNNFSNDNKLGEGGFGPVYKGTLQDGQVIAVKRLSKNSVQGSIEFKNEVILCAKLQHRNLVKVIGCCIEGDEKMLLYEYMPNRSLDLFIFDPVQSRFLDWPVRFNMLNAIARGLLYLHQDSILRIIHRDLKASNILVDNDMNPKISDFGMARMCGGDQIEGKTSRIVGTYGYMAPEYVIHRLFSIKSDVFSFGVLLLEIISGRRNRALTYHEHDHNLIWHAWRLWREDIPHELIDECLRDSCILHEALRCIQVGLLCVQHVPNDRPNMTTVVMMLGSEITLPQPKEPGFLNQRVSIEETSSSSREEIPSINGITISRLNAR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1982 816 SMART serkin_6 499 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1982 816 Pfam D-mannose binding lectin 68 174 IPR001480 -
Mtr5g1982 816 Gene3D - 13 144 IPR036426 -
Mtr5g1982 816 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1982 816 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 27 809 - -
Mtr5g1982 816 ProSiteProfiles Bulb-type lectin domain profile. 19 141 IPR001480 -
Mtr5g1982 816 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Mtr5g1982 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 179 IPR036426 -
Mtr5g1982 816 SUPERFAMILY Protein kinase-like (PK-like) 482 798 IPR011009 -
Mtr5g1982 816 CDD B_lectin 27 148 IPR001480 -
Mtr5g1982 816 CDD STKc_IRAK 505 770 - -
Mtr5g1982 816 CDD EGF_CA 283 316 - -
Mtr5g1982 816 Pfam Protein tyrosine and serine/threonine kinase 502 768 IPR001245 GO:0004672|GO:0006468
Mtr5g1982 816 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Mtr5g1982 816 SMART blect_4 25 148 IPR001480 -
Mtr5g1982 816 CDD PAN_AP_plant 336 417 - -
Mtr5g1982 816 Gene3D Phosphorylase Kinase; domain 1 464 574 - -
Mtr5g1982 816 Pfam PAN-like domain 337 405 IPR003609 -
Mtr5g1982 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Mtr5g1982 816 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Mtr5g1982 816 SMART ntp_6 340 418 IPR003609 -
Mtr5g1982 816 Gene3D Hepatocyte Growth Factor 336 419 - -
Mtr5g1982 816 Gene3D Transferase(Phosphotransferase) domain 1 575 778 - -
Mtr5g1982 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 809 - -
Mtr5g1982 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Mtr5g1982 816 Pfam Domain of unknown function (DUF3403) 774 816 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1982 Mtr-Chr5 24730225 24734262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1982 429 784 Receptor kinase-like Gene Family AT4G23230 51.944 5.24e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g1982 PK_Tyr_Ser-Thr 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1982 - - gmx:100790436 1098.19