Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1977 ATGCAAAGCTTCAAAACAGCTCAATCAAACTCTCAACTCTATTGCCACCAACCCTTCTTGCTTAGAGGAGAAGACATAAACAGAAACACAATGCGTTTTTCTGATATTGGAGACTTTCATCATTCTTCTCCTTTCTTTCCACAACAAGATGTTGTTGATTTAACTTCAAATTGTATGTTTAGTAGTGTAAAGTCGAACAATGTTGTTATAGGTGGTAGTAACATGCAGTATGGGACAACAATCAACATGAATGTTGGGTCTGCAGAGATTGCTTCAAATGGTGCAGGGTGTTCGGATGCAGGGCTGCAGCAGCACCAGCAGCAGCACCAACTGATGTACAACAAGGGAATAGCTTCCTTGCCTTTGGGGAATTGTCATGTTGAGAATTGGGCTGATTCTGGCGTGGCTGATAATAATAGCCAACAGACTGATGATACTTCCACTGATATTGATATCGATACCGATGATAAACACCAATCCAATGGAGGAAACGCTCACTCTAATAATCAGACCAAGTTCAGAGCTGAAGATCACAAGACCCTTCGCAGACTTGCTCAGAATCGCGAGGCGGCAAGGAAAAGCCGGTTACGGAAGAAGGCATATGTACAGCAGCTGGAGAGCAGTCGAGTCAAGCTTATGCAATTAGAGCAAGAGCTTCAACGAGTACGTGAACAGGGCATGTTTATTGCAAATCCTGGAGATCAAGGTCATTCGTCTGTTGGAAATGGTGCTCTAGCATTTGACATGGAATACACCCATTGGGTTGACGAGCATCAACGTATGCTCAATGATCTAAGATCGGCGTTAAATTCTCAAATGGGTGATAATGAATTGCATCTGCTTGTCGATGGTGTTATGTCACATCATAATGAGTTATTTAGGTTAAAGAGCATAGGGGCAAAGACTGATGTATTTCACATGCTCTATGGGTTGTGGAAGACACCAGTAGAAAGATTTTTTATTTGGCATGGTGCATTTCGTTCATCTGAAATTCTCAAGATAGTAAAGAACCACCTCGAGCCGTTAACTGAAAATCAGTTGATGGGAATTTGTAGTCTTCAGCAGTCTACTCAGCAGGCTGAGGATGCTTTATCTCACGGCATGGAAGCATTGAAACAATCTCTTTTAGAAACACTTTCCTCTACCCCCTCAGTATCCGGTACAGGTTCTGGAAATGTATCTGATTACATGGGCCAGATGGCATTTGCAATGAACAAGCTTGCATCCCTAGAGGATTTTCTTCATAAGGCTGACCTCTTGAAGCAAGAAACTCTGCAACAGTTGCAAAGAATTTTGACGACACGTCAGACTGCAAGGGCTCTCCTTGTCAGAAATGATTACATTTCAAGACTACGAGCACTTAGTTCGTTATGGTTGGCACGCCCAAGGGAGTAG 1395 0.428 MQSFKTAQSNSQLYCHQPFLLRGEDINRNTMRFSDIGDFHHSSPFFPQQDVVDLTSNCMFSSVKSNNVVIGGSNMQYGTTINMNVGSAEIASNGAGCSDAGLQQHQQQHQLMYNKGIASLPLGNCHVENWADSGVADNNSQQTDDTSTDIDIDTDDKHQSNGGNAHSNNQTKFRAEDHKTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLMQLEQELQRVREQGMFIANPGDQGHSSVGNGALAFDMEYTHWVDEHQRMLNDLRSALNSQMGDNELHLLVDGVMSHHNELFRLKSIGAKTDVFHMLYGLWKTPVERFFIWHGAFRSSEILKIVKNHLEPLTENQLMGICSLQQSTQQAEDALSHGMEALKQSLLETLSSTPSVSGTGSGNVSDYMGQMAFAMNKLASLEDFLHKADLLKQETLQQLQRILTTRQTARALLVRNDYISRLRALSSLWLARPRE* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1977 464 MobiDBLite consensus disorder prediction 133 147 - -
Mtr5g1977 464 Pfam bZIP transcription factor 178 214 IPR004827 GO:0003700|GO:0006355
Mtr5g1977 464 SMART brlzneu 175 238 IPR004827 GO:0003700|GO:0006355
Mtr5g1977 464 ProSiteProfiles DOG1 domain profile. 244 461 IPR025422 GO:0006351|GO:0043565
Mtr5g1977 464 Gene3D - 178 227 - -
Mtr5g1977 464 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Mtr5g1977 464 SUPERFAMILY Leucine zipper domain 179 221 IPR046347 GO:0003700|GO:0006355
Mtr5g1977 464 MobiDBLite consensus disorder prediction 133 177 - -
Mtr5g1977 464 Coils Coil 198 225 - -
Mtr5g1977 464 CDD bZIP_HBP1b-like 179 230 - -
Mtr5g1977 464 Pfam Seed dormancy control 262 336 IPR025422 GO:0006351|GO:0043565
Mtr5g1977 464 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Mtr5g1977 464 PANTHER TRANSCRIPTION FACTOR TGA9 38 464 - -
Mtr5g1977 464 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 38 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1977 Mtr-Chr5 24649305 24652944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1977 3 464 bZIP Transcription Factor Family AT1G68640 51.559 8.63e-145 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr5g1977 DOG1 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1977 K14431 - gmx:100797393 585.104