Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1963 ATGGATATGAGTGAAATTCTTGAAATTTTTCAAGTTTCAAATATGGGCAACATTACCGGGGAAGGCAATATAGGTGAAGAAGGTTCAGAGAGTGTTGTGTGTTCCTCGGATGATGATACGGAAGACACGTTCAATTCAATGTATGAGTGCAGTTTTGATGATGAATTTGCGGTCGATTGCACGACTAACTTTGAGAAAATCAATTTCAAGGAATTAACCTACGATGAAATTATGATGTACCATTTTCCGGATCGTGTAGTTGCATTCAAGTTTTACAATATGTACGGTTGTGCGCATGGATTTGCTGGTAGAAGAAGTCGCGTTGTTAAGAACAAGGATGGCGATGTTATTCAACAATCCTTTGTTTGCCATAGAGAAGGTCTCCGGGATGCAAGGAATCTCAATACTCGTGAAAGAAAAAGAGAGCACAAGCCAACTACTAGGTGTGGATGTATGGCAAAAATTCAAGTACACGTTGACAATGGTAGTAATCGGTGGTACATAAAAATGTTTGACGATATTCATAATCACACATTTTTTGATGAGAAGTATGAGGGGATGCTACCTGCACATAGAAAGATGAGTGATTATGACAAATTTCAAATGAAAGCAATGAGAAAAGCTGGCATTCCTACGTCACGTATTTATGGTTTTTTTGCCTCACAAGCTGGTGGATTCAAAAATCTTGGATATTCAAAAAGGACCATATACAATGAGCAATTCAAGGAGAGGGAGAGGAAGACATCTGATGCAGATGAAGCGGTTGAATTTTTGAAGGAATTGTCTAGGACGGACGATATGATGTACTGGAGGCACACTGTGAATGAGGATGGAACACTTCAACATTTATTTTGGTGTGATGGTGTTAGCCGTATGGACTACAAGGTGTTTGGAGATGTTTTGGCATTTGATGCTACTTATCGGAAAATTAGATATAATACATCGTTAGTTATTTTTTCCGGTGTAAATCATCACAATCAAAGTGTAATATTCGGCAGTGCAATTGTTGGTGATGAAACTGAGGTAAGTTACGTGTGGCTCTTGCAACAATTTCTTGAGGCAATGGACGGAAAGGCACCGGTGTCGGTTATAACTGACGGAGATTTATCCTTGAGAAATGCTATCAGAAGTGTATTTCCACATGCTCATCATCGTTTGTGTGCCTGGCACTTGGCAAGAAATGCATCAAGCAATATCAAAAATCCAAAATTTGTCCCGAAGTTCAAACAATGTATGTTTGGTGATTTTGATATCCAAGAGTTTGAAAGTAGGTGGGTGAATTTGGTTGCTGAATTTGAGTTGGAAAATAACAGGTGGATTCATGAGCTGTATGAGAAGCGGCATCAATGGTCAACTGCCCACATTCGGGGTACTTTCTATGTTGGGTATAGAACAACCTCAAGGTGTGAGGGGCTTCATTCTGAATTTGGAAAATATGTTACCGTGTTGTCAAATCTGGTGGATTTTTTAAATCATTTTATCCGGTGGCTGAGTTACGTCAGATACAGAGAAATAGAGGCGGATTATGCATCTTCCATTGGTGAAACCGTTCTACAAACCCAACATAAAAGTTTAGAGAGCTCAGCAGCAAAAAACTATACAAGGTCAGTTTTCAAGCTATTTAGGCCTGTTTTGGAGAGAGCTTGTCGTTGTAAAATCGAAGGAACTTTCTGCAATGGTTCCATTTTTCATTATATTGTTTTCAAATACCCTAGAGATGACATTCATTGGACTGTTTCATATTGCCAAGAGCGATTAACATTTGAATGCTTTTGCAAGAGATTGGAGACATATGGTGTTCCATGTGAACATATCGTAGCTGTTTTAGTGAAAATGAACATAAGAAAATTGCCGGAATCTGTTGTGTTGGAACGATGGACCAGACGTGCTAAAGATGTAATCAATGCCGAAAATGGTAATAGTTCAACTCACCGGGATCCTGCATTTGTAACTACGTATGTTATGTTTCTGGAGCGTTGCAAGAGGATGGCAAACGCAGTGTTAAAGTGTGGCAATCCAAACTATATACACAAAACCATGGAAATGGTTGAACAACACACTGAGAAATTGGAATCATACAACAGGGGTGAAGTTGATGAGATGTTTGATAGGTTTTCGAAGACAGGAACAAGTTTAGGTAATCCGCACAACTCAGAAAAAGAGGTGGAGCAGCACCCGGTTCTTCAACTAGACGTGCAACTGCGGAAAAAAAAAACGGAGTACGCCTAA 2229 0.3939 MDMSEILEIFQVSNMGNITGEGNIGEEGSESVVCSSDDDTEDTFNSMYECSFDDEFAVDCTTNFEKINFKELTYDEIMMYHFPDRVVAFKFYNMYGCAHGFAGRRSRVVKNKDGDVIQQSFVCHREGLRDARNLNTRERKREHKPTTRCGCMAKIQVHVDNGSNRWYIKMFDDIHNHTFFDEKYEGMLPAHRKMSDYDKFQMKAMRKAGIPTSRIYGFFASQAGGFKNLGYSKRTIYNEQFKERERKTSDADEAVEFLKELSRTDDMMYWRHTVNEDGTLQHLFWCDGVSRMDYKVFGDVLAFDATYRKIRYNTSLVIFSGVNHHNQSVIFGSAIVGDETEVSYVWLLQQFLEAMDGKAPVSVITDGDLSLRNAIRSVFPHAHHRLCAWHLARNASSNIKNPKFVPKFKQCMFGDFDIQEFESRWVNLVAEFELENNRWIHELYEKRHQWSTAHIRGTFYVGYRTTSRCEGLHSEFGKYVTVLSNLVDFLNHFIRWLSYVRYREIEADYASSIGETVLQTQHKSLESSAAKNYTRSVFKLFRPVLERACRCKIEGTFCNGSIFHYIVFKYPRDDIHWTVSYCQERLTFECFCKRLETYGVPCEHIVAVLVKMNIRKLPESVVLERWTRRAKDVINAENGNSSTHRDPAFVTTYVMFLERCKRMANAVLKCGNPNYIHKTMEMVEQHTEKLESYNRGEVDEMFDRFSKTGTSLGNPHNSEKEVEQHPVLQLDVQLRKKKTEYA* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1963 742 Pfam MULE transposase domain 300 394 IPR018289 -
Mtr5g1963 742 SMART 26again6 588 615 IPR006564 GO:0008270
Mtr5g1963 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 692 IPR031052 GO:0006355
Mtr5g1963 742 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
Mtr5g1963 742 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Mtr5g1963 742 PANTHER OS02G0262500 PROTEIN 74 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1963 Mtr-Chr5 24317327 24319710 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g1963 MULE 1.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1963 - - adu:110280242 611.298