Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1945 ATGGCCACTGCCACTGTCTTTCCCTCACTACTCCCTTTGCTCTTTCTTGCTAGAGTTTGTGGTCTTTCAGTAGCATTTCTTGTTCTCTTCTGGGCTCTTACTTTCAAATCTAGCTTCCTCAATACTTCTAATTCCCTTCCTCAACAGGATCTCATCTATGCAGTTCTCCATCCTGTGCTTATGGTCATTGGTTTTATCCTTTTAAGTGGAGAAGCAATTTTGGTGCATAGATGGTTACCTGGATCAAGAGGGTTGAAGAAATCGGTGCATTTATGTCTTCAAGGGGTGGCTTTAGCTTCTGGGATATTTGGGATTTGGACAAAATTCCAAGTAAATGATGGGATTGTGGCTAATTTCTACAGTCTGCATTCATGGATGGGTTTGATTTGTGTATCACTCTTTGGAGCTCAGTGGCTAATAGGCTTCTTGAACTTTTGGCACCGAGGAGAAATACGAACAGTGAGGATAAAGATCTTACCATGGCATGTATTTCTTGGCTTATACACTTATGCATTGGCAGTAGCAACGGCTGAAACTGGATTATTAGAGAAGTTGACATTCTTGCAAACACAGAGAAATGTATCCAAACACAGCACTGAGTCCATGGTTGTAAATTCTTTAGGCCTTGGTCTTGCTCTTCTTAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCAAATTCTTCAAAGCAAACTATTGTACTCAGATTCTAGGTGTTTGGCATCTTAA 735 0.4068 MATATVFPSLLPLLFLARVCGLSVAFLVLFWALTFKSSFLNTSNSLPQQDLIYAVLHPVLMVIGFILLSGEAILVHRWLPGSRGLKKSVHLCLQGVALASGIFGIWTKFQVNDGIVANFYSLHSWMGLICVSLFGAQWLIGFLNFWHRGEIRTVRIKILPWHVFLGLYTYALAVATAETGLLEKLTFLQTQRNVSKHSTESMVVNSLGLGLALLSGFVILAAVSPKYQILQSKLLYSDSRCLAS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1945 244 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 4 243 - -
Mtr5g1945 244 PANTHER CYTOCHROME B561-RELATED 4 243 IPR043205 GO:0016491
Mtr5g1945 244 Pfam Eukaryotic cytochrome b561 56 187 IPR006593 -
Mtr5g1945 244 Gene3D - 5 232 - -
Mtr5g1945 244 CDD Cyt_b561_ACYB-1_like 56 189 - -
Mtr5g1945 244 ProSiteProfiles Cytochrome b561 domain profile. 16 223 IPR006593 -
Mtr5g1945 244 SMART 561_7 56 181 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1945 Mtr-Chr5 23983319 23985864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1945 4 244 Chloroplast and Mitochondria Gene Families AT1G26100 63.415 3.00e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1945 K08360 - gmx:100781811 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1945 5 23983319 23985864 Mtr5g1945 5 23983319 23985864 ECH