Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1887 ATGGGTGATTTCGTGTCTAGGCCGGAGTTGCAAGTTATTGGAGCGAAACAGTTAGTGGACAGTGACACCTATCTTTACCTGTCTGATGGTATCCACTTTAAACCTGGATTGCTCCAATTGGATGATGACTTCAATCTCTCAAGTCTGCATGTAGGCTCGATTGTTAGACTCACTGATTACTTTGTGGACAAGTGGATTATTTTTATCAATGACCTTGAAGTTGTACAGGACAAATGTGATCTGATCGGAGAACACGTGACTCCCCTCTATTCTGGCGAAAGGGCTGATCTGACTGAAGGGGCGATCGCAAGAATGTGCTGCGACAAATTCTCTTGTGATGAAGAGTTTAAGCCGACGCTGTTGCAAGTTATCCACGTGTATACCCACCAGCTTTTGTTGTCTGACGGTTTGAATTTTAATATTGCAACCCTCCCAATGAATTTGGAATGGAACTCAAAGCTACAGGTTGGCTCAGTTGTTGAACTCAAAAGCTTCACCGTGTGTGCAATTCAAAACACCAGGGTTATTCACATTTTTGACCTAGACGTCATACAGGAAAAACGCATGCTGATCGGAAAACCTCTCCCACTACCCAAAAATGCACCTGTCCTAGATGTTAAACTGGATAAAGGTGTTCAGAACCTTATGCTACTGGAGTTCAACAAGTGTCATGTGTGTGATGTATGA 687 0.4323 MGDFVSRPELQVIGAKQLVDSDTYLYLSDGIHFKPGLLQLDDDFNLSSLHVGSIVRLTDYFVDKWIIFINDLEVVQDKCDLIGEHVTPLYSGERADLTEGAIARMCCDKFSCDEEFKPTLLQVIHVYTHQLLLSDGLNFNIATLPMNLEWNSKLQVGSVVELKSFTVCAIQNTRVIHIFDLDVIQEKRMLIGKPLPLPKNAPVLDVKLDKGVQNLMLLEFNKCHVCDV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1887 228 SUPERFAMILY Nucleic acid-binding proteins 95 192 IPR012340 -
Mtr5g1887 228 Gene3D - 95 197 IPR012340 -
Mtr5g1887 228 Gene3D - 2 88 IPR012340 -
Mtr5g1887 228 SUPERFAMILY Nucleic acid-binding proteins 3 83 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1887 Mtr-Chr5 21688598 21690331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1887 9 91 Core DNA Replication Machinery Family AT5G45400 33.333 7.44e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1887 - K07466 mtr:MTR_5g048670 464.536