Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1845 ATGTCTTCCTCCTCTGATGATCATCCATGGACCTATGACGTGTTCATAAGTTTTAGAGGGGAGGATACTCGCAACACTATTGTTTCTCATCTCTATGCTGCACTCCAAAACTCAGGAGTCTACACTTTTCTTGATGATCAGAAGCTTACAAAGGGAGAAGTGCTTGGACCAGCACTAAGGAAGGCAATAGAAGAGTCTAAGATATTTATTGTTGTTCTCTCACCGGACTATGCAGGATCTAGCTGGTGTCTTCGCGAACTTGTACATATCATGGATTGCCACGAAAGTTATGGCCGGATCGTTTTACCTGTATTTTACGGTGTTGAACCATCGGAGGTCCGTAAGCAGTCGGGTGATTTTGGAAAAGCCTTGAAGCTGACTGCAACAAAAAGAGAAGATCAACTACTGTCCATGTGGAAGACCGCACTCACAAAAGTAGGAAATCTAGCCGGCTGGGATTACAACATTTTCAGGAATGAAGGTGAACTAGTGGAGCTAATTGTTGAGGACATTTTGAGAAAACTAGATATCTCATTGTTGTCTATTACTGAATTTCCGATTGGATTGGAATCCCATGTGCAACAAATTACCAAGATTATTGATGATCAATCATGCAAAGTCTGTATCATAGGGATATGGGGAATGGGTGGATTAGGCAAAACAACCACGGCCAAAGCTCTCTACAATCAAATCCATCGTAGATTCCAGGGTAGAACAAGTTTCCTTGAAAGTATTAGAGAAGTTTGTGATAATAATAGTGGAGGGGTTATTACTTTACAAGAACAACTTCTTTTAGATCTCCTTGAAATAAAACAGAAGATTCACAGTATTGCATTGGGGAAAACTAAAATCATGACAAGACTCCAGCGACAAAAGGTTTTGGTCGTACTCGATGATGTGACCAAGTCTGAGCAATTAAAAGCACTGTGTGCAAATCCTAAGTTGTTAGGTTCGGGGAGTGTATTGATTATTACCACTAGAGATTTACGCCTTCTCAAGTCATTTAAAGTTGACCATGTCTACACCATGACTGAAATGGACAAACACCAATCCCTTGAACTTTTCAGTTGTCATGCTTTTCAACAACCAAACCCTAGAGACAAATTTAGCGAACTCTCTAGAAATGTAGTTGCTTATTGCAAAGGATTACCCCTGGCTCTTGAAGTCCTTGGATGTTACTTATCTGAGAGGACGGAAAAAGAATGGAGAGATGCACTACAAATATTAGAGAAAATTCCCAACAATGATGTGCAACAGATATTGAGAATCAGCTATGATGGTTTAGAAGATTATACGAAACAGGACATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGGGTGTGGACTTCATGCTGATATTGGAATATCTATTCTCATAGAGCGCAGCCTCGTAAAAGTCGAAAAGAATAACACGCTTGGAATGCACGATTTGCTCAGAGACATGGGAAGATCAATTGCTGGTGAAAGTTCAATCAAAGAGCCTGCAAAGCATAGTCGATTGTGGTTTCATGACGATGTGAACGATGTCTTGTTAAAAAAAAATGGTACAGAAATTGTTGAGGGATTGATTTTTGAGTTGCCAATAACACATAGAACTAGATTCGGTACTAATGCTTTCCAGGACATGAAAAAACTGAGGCTTTTAAAACTTGATGGTGTTGACCTCATCGGAGATTATGGTTTAATTTCCAAACAACTGAGATGGGTTGATTGGCAACGACCTACCTTCAAATGTATACCAGATGACTCTGATCTAGGAAATCTAGTTGTTTTTGAATTAAAACATAGCAATATTGGACAAGTTTGGCAGGAGCCCAAGCTGTTAGACAAGCTGAAAATTCTCAATGTCAGTCATAATAAGTACTTGAAAATCACCCCAGACTTTTCAAAATTACCGAATCTAGAAAAGCTCATTATGATGGAATGTCCGAGCTTGATTGAGGTACACCAGTCCATTGGGGACCTCAAGAATATCGTTCTGATAAATTTGAGGGACTGTAAAAGTCTTGCCAATCTCCCAAGAGAGATCTATCAATTGATATCGGTGAAAACTCTTATTCTTTCTGGTTGTTCAAAGATTGAGAAATTGGAAGAAGATATAATGCAAATGGAATCCTTGACAGCTCTAATTGCAGCAAATACTGGTATCAAACAAGTGCCCTATTCAATAGCAAGATCAAAAAGCATTGGATATATATCACTATGTGGATATGAAGGATTATCACATGATGTTTTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACCAGAAATTCCCTGTCCCATGTTTTTCCATTTGCAGGCAATTCATTGTCTCTAGTTTCTTTGGATGTAGAGAGTAATAATATGGACTATCAATCACCGATGGTTACCGTCCTATCAAAGCTTCGATGTGTTTGGTTTCAATGCCACTCAGAGAATCAACTTACTCAAGAATTAAGAAGATTTATTGATGATCTATATGATGTGAATTTTACTGAGTTGGAAACAACATCACATGGACACCAAATCAAAAATCTTTTCTTGAAATCACTTGTGATTGGAATGGGAAGTTCCCAAATAGTCACAGATACTCTTGGCAAGAGCTTAGCACAGGGTTTGGCAACCAATTCTAGTGATTCTTTCCTTCCGGGTGACAATTATCCTTCTTGGTTAGCCTATAAATGCGAAGGATCTTCTGTACTTTTTCAAGTGCCTGAGGATAGTGGTTCCTGCATGAAGGGAATAGCTTTGTGTGTTGTTTATTCGTCAACACCTCAAAACCTGCCAATTGAATGTATCACTAGTGTCTTGATCATTAATTACACAAAGCTCACAATCCAGATTTACAAGGATGACACAATAATGTCTTTTAATGATGAAGATTGGGAAGGTGTATTGTCAAATTTAAAAGTTGGTGACAATGTGGAGATTTTTGTAGCTATTGGGCATGGATTTACTGTTAAGGAGACGGCTGCGTATCTTATATATGGTCAGCCAACTGCTGTGGAAATTGAACCAATACCTGAAGTGGACGCGCAACCATCACCTGATGCGAAAACGGAGCCATCACCTGAAGTGGAAGCGCATTCATCACCTTATGCGAAAAGGAGACGACTGTCTATCTAG 3144 0.3903 MSSSSDDHPWTYDVFISFRGEDTRNTIVSHLYAALQNSGVYTFLDDQKLTKGEVLGPALRKAIEESKIFIVVLSPDYAGSSWCLRELVHIMDCHESYGRIVLPVFYGVEPSEVRKQSGDFGKALKLTATKREDQLLSMWKTALTKVGNLAGWDYNIFRNEGELVELIVEDILRKLDISLLSITEFPIGLESHVQQITKIIDDQSCKVCIIGIWGMGGLGKTTTAKALYNQIHRRFQGRTSFLESIREVCDNNSGGVITLQEQLLLDLLEIKQKIHSIALGKTKIMTRLQRQKVLVVLDDVTKSEQLKALCANPKLLGSGSVLIITTRDLRLLKSFKVDHVYTMTEMDKHQSLELFSCHAFQQPNPRDKFSELSRNVVAYCKGLPLALEVLGCYLSERTEKEWRDALQILEKIPNNDVQQILRISYDGLEDYTKQDIFLDICCFFIGKNRADVTEILNGCGLHADIGISILIERSLVKVEKNNTLGMHDLLRDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTEIVEGLIFELPITHRTRFGTNAFQDMKKLRLLKLDGVDLIGDYGLISKQLRWVDWQRPTFKCIPDDSDLGNLVVFELKHSNIGQVWQEPKLLDKLKILNVSHNKYLKITPDFSKLPNLEKLIMMECPSLIEVHQSIGDLKNIVLINLRDCKSLANLPREIYQLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQVPYSIARSKSIGYISLCGYEGLSHDVFPSLIWSWMSPTRNSLSHVFPFAGNSLSLVSLDVESNNMDYQSPMVTVLSKLRCVWFQCHSENQLTQELRRFIDDLYDVNFTELETTSHGHQIKNLFLKSLVIGMGSSQIVTDTLGKSLAQGLATNSSDSFLPGDNYPSWLAYKCEGSSVLFQVPEDSGSCMKGIALCVVYSSTPQNLPIECITSVLIINYTKLTIQIYKDDTIMSFNDEDWEGVLSNLKVGDNVEIFVAIGHGFTVKETAAYLIYGQPTAVEIEPIPEVDAQPSPDAKTEPSPEVEAHSSPYAKRRRLSI* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1845 1047 MobiDBLite consensus disorder prediction 1012 1047 - -
Mtr5g1845 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 439 IPR027417 -
Mtr5g1845 1047 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1002 - -
Mtr5g1845 1047 Gene3D - 9 178 IPR035897 -
Mtr5g1845 1047 Gene3D Ribonuclease Inhibitor 548 859 IPR032675 -
Mtr5g1845 1047 Pfam TIR domain 12 179 IPR000157 GO:0007165
Mtr5g1845 1047 Gene3D - 345 429 IPR042197 -
Mtr5g1845 1047 SMART till_3 11 149 IPR000157 GO:0007165
Mtr5g1845 1047 PRINTS Disease resistance protein signature 209 224 - -
Mtr5g1845 1047 PRINTS Disease resistance protein signature 287 301 - -
Mtr5g1845 1047 PRINTS Disease resistance protein signature 380 394 - -
Mtr5g1845 1047 PRINTS Disease resistance protein signature 665 681 - -
Mtr5g1845 1047 ProSiteProfiles TIR domain profile. 10 175 IPR000157 GO:0007165
Mtr5g1845 1047 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1002 IPR044974 GO:0006952
Mtr5g1845 1047 SUPERFAMILY L domain-like 486 823 - -
Mtr5g1845 1047 Pfam NB-ARC domain 190 425 IPR002182 GO:0043531
Mtr5g1845 1047 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 152 IPR035897 -
Mtr5g1845 1047 Gene3D - 179 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1845 Mtr-Chr5 20773764 20779205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1845 620 736 WRKY Transcription Factor Family AT4G12020 34.188 4.24e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1845 - - mtr:MTR_2g437560 1205.66