Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1837 ATGGCTTTTATTTCTGAAGTCAACATGAGCTATTCTCAGTCTCATTACATGGATGATGAATATGAGAAACTCTTTAGGAGAATGAACCCTCCAAGGGTTGTAATTGATAATGGAGCCTCCCAAAATGCCACTGTTATAAGGGTTGATAGTGCTAACAAACAAGGAATACTTCTTGAAGTTGTTCAAATCCTCACTGATCTAAATCTCATCATAACTAAGGCTTACATTTCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTAACTGACCAAGATGGAAACAAGGTAACAGATGAAGTCATTTTGGATTATATTAGAAAGTCTCTTGGTCCTGAATCCTGCTTTGCAACTACTATGAGATCTGTTGGTGTTAAACAAACACCGGACCACACGGCAATAGAGCTTATGGGAAGTGATAGGCCAGGATTGCTTTCAGAAGTGAGTGCTGTTCTCACAAACCTCAAATGCAACATAGTGAATGCGGAGGTTTGGACTCACAACATGCGCGCAGCGGCTGTGATGCATGTGACCGATGAGGAAACCGGTTCTGCTATAACTGACTCACAGAGGCTTTCGCTAATCAAGGAGCTTCTGTGTAATGTGCTTGGTGGTGGAAACAGGAAAAGAGGTGCTAAGACTGTTGTTACTGATGATTCGACGCATACTGATAGAAGGCTTCATCAGATGATGTTTGATGATAGGGATTATGAACGTGTTGACGACGACGACTTTGACGAGAAGCAAAGACCAAATGTTGATGTTGTGAACTGGTCTGATAAGGATTATTCTGTTGTTACTATTGAATGTAGGGATAGGCCGAAGCTTGTTTTCGACACTGTTTGTACTTTGACAGATATGCAATATGTAGTTTTTCATGCTAATATTGATGCCGAGGGGCCACAAGCTTATCAGGAATATTACATCAAGCATATAGATGGGTCCCCTGTAAAATCAGATGCAGAAAGACAGAGAGTGATACATTGTCTTGAAGCTGCTATTGAGAGAAGAGTTTCCGAGGGTTTGAAGCTAGAACTCTGCACCACCGACAGAGTCGGCCTATTATCGAACGTAACACGTATCTTTAGAGAGAATAGCCTCACAGTTACAAGGGCAGAAGTAACAACAAAAGGAGGAAAAGCTGTTAACACTTTCTACGTTCGAGGAGCTTCTGGTTGCATTGTTGATTCTAAAACAATTGAATCCATTAGGCAAACAATTGGTAACACAATACTCAAAGTTAAGGGTAGTCCTGAATCTCTACCTCAAGATTCTCCTACAAGATCATCAATCTTTAGTGGTCTTTTTAAGTCTAGATCTTTTGTTAACTTTGGTTTGGTTAAGTCTTACTCTTGA 1356 0.4041 MAFISEVNMSYSQSHYMDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLCNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDDFDEKQRPNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKGSPESLPQDSPTRSSIFSGLFKSRSFVNFGLVKSYS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1837 451 SUPERFAMILY ACT-like 41 108 IPR045865 -
Mtr5g1837 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 8 449 - -
Mtr5g1837 451 ProSiteProfiles ACT domain profile. 45 125 IPR002912 -
Mtr5g1837 451 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 8 449 IPR040217 -
Mtr5g1837 451 Gene3D - 129 201 - -
Mtr5g1837 451 Pfam ACT domain 134 185 IPR002912 -
Mtr5g1837 451 ProSiteProfiles ACT domain profile. 133 220 IPR002912 -
Mtr5g1837 451 CDD ACT_ACR_1 43 113 - -
Mtr5g1837 451 CDD ACT_ACR_3 263 337 - -
Mtr5g1837 451 ProSiteProfiles ACT domain profile. 343 423 IPR002912 -
Mtr5g1837 451 SUPERFAMILY ACT-like 128 196 IPR045865 -
Mtr5g1837 451 SUPERFAMILY ACT-like 339 408 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1837 Mtr-Chr5 20626740 20630433 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1837 - - gmx:100787134 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1837 5 20626740 20630433 Mtr5g1837 5 20626740 20630433 ECH