Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1835 ATGAAGAAAACTCACATAATAGTGTCATCTAGATTTGCAACTATGTTTACACACCTCTTAATATTGTTCTTCTTTTTCTTCATCCATTTAACATTTTGTGATGATTCTACAAACATCCTCCTTAATTGTGGTTCATATGGATTATCAACCTACAATGGTGTAAGTTGGATAGGAGACATTGGAACACCTTTCTTTCCTCAACCATATGACACAATTTCATCAACAACACTCTTAAACTCAAGCACACACAAAGTAGCACCAAAAATCCCATATTCAACTGCAAGAATAGTTCATCATTCTTCATTGACCTACTCATTCCCTTTCTCTTCCAATGGCCTTAAATTCATTCGTTTATACTTTCTCTCAACTTCATATTTACCAATAGAGTATTCAAATTCCAACTCCTATTTTTCGGTTAAATCCGGTCCTTACACTCTTGTTAACAATTTCAATCCATTACTTGCTTCACAAGAAATCGAATCACCTTATATCACTAAGGATTTCTTTGTTAACATCAAAGAAAAGAAACTCAACATTACTTTCACTCCATCTCCTCAAATTCATAAAGCTTTTGCTTTTATAAATGGAATTGAAATATTCTCAGTACCTAACAATTTATTCTCTCATGCTTCAAATTACAAGGTTCATGTTCCTTATCTTGGACGAAAAGAGCCGTTTATTATCAGCCATGAATATGCTTTTGAGAAGTTTTACATGGTCAACATGGGTCATAATTACATAGAGAATAAAAATGCATTTGGGTCATGGTTAGATGATATCAACTACATATCTGGTTCACAAGATGGAACTGTTCTTGTCATGAAGGATGCTAGAGTTAATATGAATCGAAGTTTTCTCGATTCGAATGACTATAACTATTCAGCACCTGAAGAATTATATTGGTCAGCAAGAACAATGAGTAGTAGCAATGGTGATTCCAATATAAGGTACAATTTAACATGGTCATTTCGTGTTGATTCTGGATTCAAGTATCTTGTTAGGCTTCATTTCTGTGAGATATCGATGTCGGTAACAGATATTAATCAGAGGGTTTTTGATGTTTATATAAACAACCAAACAGCAGAGGAGAAATTGGATTTAGTTGCTTTGGCTGGTGAACCTTTTACTCCTTTGTATAGAGACTATGTTGTAATGGTTCCTATAGAGACCATGTTGATATCACTTCATCCGAATTTGGAGTCGAAACCAAAGTATGCTGATGCTATATTGAATGGTGTTGAGATTATCAAGTTAAGTGATAGCAATTATAATCTTGCTGCAAGTTTCCAATTGAAGAATGAAAAACTACACAATAAGAAGAAATTTCCAATTTTTTTTGTTGTTGTAGCTAGTACTTTAGGTTCCACTTTGGGACTTTTCATAACATTTTTCATTCTTAGAAGAAAAGGGTGGACAAGAATAAATTGGGGAACTTTGAATTCTACCGAAAAAGGTGAAGAAAAGATTCAAGTAAAGGTGATATCAGGTAATTGTTATCAATTCACTTTAGCAGAGATTATATCGGCAACAAACAACTTCAATGATGATCTAGTCATTGGTGAAGGTGGTTTTGGAAAGGTATACAAAGGAATCATCATGCTTGATGAAGAGACTAGTGTGGCGATAAAGCGTGCTAAACCGAGTTCACGGCAAGGACTTAAGGAATTTCAAAATGAGATCAATTTTCATTCATTTTATCACATGAATTTAGTGTCATTGTTGGGCTATTGCCAAGAGAGCATTGAACTTATACTTGTGTATGAATACATGGATCAAGGTCCACTTTGTGATCATTTATACAAGAAACAGAAGCAACCACTTCCATGGAATAAAAGACTAGAGATTTGTGTTGGTGCAGCTAGAGGAATCCATTACCTTCATACAGGTAGAAAGAATCCGGTGATTCACCGCGATATAAAGTCGTCGAACATATTATTGGATCAGAATTTGGTACCAAAGATTGCAGATTTTGGGTTGTCTAGAATGGTTAATTCTATTTACCACACTCATGTTAGCACTCAGGTTAAAGGTACATTTGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAAGTAAGTGAAAAAAGTGATGTTTATTCATTTGGGGTGGTTTTGTTTGAAGTATTGAGTGGAAGACCAGCTGTGAATTCTATGGCAGTGGAAGAGGAAAATGAGAAAGTTGGTTTGGTAGAATGGGCCATGAGTTGTTACCAAAGTGGAACTATTGATAAATTGGTTGATTCTTGTTTAGAAGGAAAAATAGGTCAAGAATGCTTAATGGCCTTTGTGGAAATTGGTGTTAAGTGCTTGGCTAACAAGAGTTCAGAAAGGCCAACTATGGGAGAGGTGGTAAGTAATTTGGAGAAAATTCTTTCCTTGCAAAAGAGTTTGGAGGGACAAGATGTCAATACAGATCATATTGATAAGTAA 2430 0.3481 MKKTHIIVSSRFATMFTHLLILFFFFFIHLTFCDDSTNILLNCGSYGLSTYNGVSWIGDIGTPFFPQPYDTISSTTLLNSSTHKVAPKIPYSTARIVHHSSLTYSFPFSSNGLKFIRLYFLSTSYLPIEYSNSNSYFSVKSGPYTLVNNFNPLLASQEIESPYITKDFFVNIKEKKLNITFTPSPQIHKAFAFINGIEIFSVPNNLFSHASNYKVHVPYLGRKEPFIISHEYAFEKFYMVNMGHNYIENKNAFGSWLDDINYISGSQDGTVLVMKDARVNMNRSFLDSNDYNYSAPEELYWSARTMSSSNGDSNIRYNLTWSFRVDSGFKYLVRLHFCEISMSVTDINQRVFDVYINNQTAEEKLDLVALAGEPFTPLYRDYVVMVPIETMLISLHPNLESKPKYADAILNGVEIIKLSDSNYNLAASFQLKNEKLHNKKKFPIFFVVVASTLGSTLGLFITFFILRRKGWTRINWGTLNSTEKGEEKIQVKVISGNCYQFTLAEIISATNNFNDDLVIGEGGFGKVYKGIIMLDEETSVAIKRAKPSSRQGLKEFQNEINFHSFYHMNLVSLLGYCQESIELILVYEYMDQGPLCDHLYKKQKQPLPWNKRLEICVGAARGIHYLHTGRKNPVIHRDIKSSNILLDQNLVPKIADFGLSRMVNSIYHTHVSTQVKGTFGYLDPEYYKRRKVSEKSDVYSFGVVLFEVLSGRPAVNSMAVEEENEKVGLVEWAMSCYQSGTIDKLVDSCLEGKIGQECLMAFVEIGVKCLANKSSERPTMGEVVSNLEKILSLQKSLEGQDVNTDHIDK* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1835 809 ProSitePatterns Protein kinases ATP-binding region signature. 519 543 IPR017441 GO:0005524
Mtr5g1835 809 CDD STKc_IRAK 519 790 - -
Mtr5g1835 809 PANTHER OS07G0166700 PROTEIN 26 801 IPR045272 GO:0004714|GO:0006468
Mtr5g1835 809 Pfam Protein tyrosine and serine/threonine kinase 518 787 IPR001245 GO:0004672|GO:0006468
Mtr5g1835 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Mtr5g1835 809 SUPERFAMILY Protein kinase-like (PK-like) 492 788 IPR011009 -
Mtr5g1835 809 Gene3D Transferase(Phosphotransferase) domain 1 590 807 - -
Mtr5g1835 809 Pfam Malectin-like domain 41 417 IPR024788 -
Mtr5g1835 809 SMART serkin_6 513 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1835 809 Gene3D Phosphorylase Kinase; domain 1 475 589 - -
Mtr5g1835 809 Gene3D - 34 203 - -
Mtr5g1835 809 Gene3D - 234 419 - -
Mtr5g1835 809 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 801 - -
Mtr5g1835 809 ProSiteProfiles Protein kinase domain profile. 513 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1835 Mtr-Chr5 20576898 20579652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1835 39 805 Receptor kinase-like Gene Family AT3G51550 42.558 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr5g1835 Malectin_like 7.5e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1835 - - mtr:MTR_5g047070 1122.84