Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1834 ATGGTCAACATGGGTGATAATTACCTAGAGAATAAAAATGCATTTGGGTCATGGTTAGATGATATCAACTACATATTTGGTTCACAAGATGGAACTGTTCTTGTCATGAAGGATGCTAGAGTTAATATGAATCGAATTTTTCTCGATTCGAATGACTATAACTATTCAGCACCTGAAGAATTATATTGGTCTGCAAGAACAATGAGTAGTAGCAATGGTGATTCCAACATAAGGTACAATTTAACATGGTCATTTCGTGTTGATTCTGGATTCAAGTATCTTGTTAGGCTTCATTTCTGTGAGATATTGATGTCGGTAACAGATATTAATCAGAGGGTTTTTGATGTTTATATAAACAACCAAACAGCAGAGGAGAAATTGGATTTAGTTGCTTTGGCTGGTGAACCTTTTACTCCTTTGTATAGAGACTATGTTGTAATGGTTCCTATAGAGACCATGTTGATATCACTTCATCCCAATTTGGAGTCGAAACCAAAGTATGCTGATGCTATATTGAATGGTGTTGAGATTATCAAGTTAAGTGATAGCAATTATAATCTTGCTGCAAGTTTCCAATTGAAGAATGAAAAACTACACAATAAGAAGAAATTCCCAATTTTTGTTGTTGTTGTAGCTAGTACTTTAGGTTCCACTTTGGGACTTTTCATAACATTTTTCATTCTTAGAAGAAAAGGGTGGACAAAAATAAATAGGGGAACTTTGAATTCTACCGAAAAAGGTGAAGAAAAGATTCAAGTAAAGGTGATATCAGGTAATTGTTATCAATTCACTTTAGCAGAGATTATTTCAGCAACAAATAACTTCAATGATGATCTAGTCATTGGTGAAGGTGGTTTTGGAAAGGTATACAAAGGAATCATCATGCTTGATGAAGAGACTCGTGTGGCGATAAAGCGTGCTAAACCGAGTTCTCGGCAAGGACTTAAGGAATTTCAAAATGAGATCAATTTTCATTCATTTTATCACATGAATTTAGTGTCATTGTTGGGCTATTGCCAAGAGAGCATTGAACTTATACTTGTGTATGAATACATGGATCAAGGTCCACTTTGTGATCATTTATACAAGAAACAGAAGCAACCACTTCCATGGAATAAAAGACTAGAGATTTGTGTTGGTGCAGCTAGAGGAATCCATTACCTTCATACAGGTAGAAAGAATCCGGTGATTCACCGCGATATAAAGTCGTCGAACATATTATTGGATCAGAATTTGGTACCAAAGATTGCAGATTTTGGGTTGTCTAGAATGGTTAATTCTATTTACCACACTCATGTTAGCACTCAGGTTAAAGGTACATTTGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAAGTAAGTGAAAAAAGTGATGTTTATTCATTTGGGGTGGTTTTGTTTGAAGTATTGAGTGGAAGACCAGCTGTGAATTCTATGGCAGTGGAAGAGGAAAATGAGAAAGTTGGTTTGGTAGAATGGGCCATGAGTTGTTACCAAAGTGGAACTATTGATAAATTGGTTGATTCTTGTTTAGAAGGAAAAATAGGTCAAGAATGCTTAATGGCCTTTGTGGAAATTGGTGTTAAGTGCTTGGCTAACAAGAGTTCAGAAAGGCCAACTATGGGAGAGGTGGTAAGTAATTTGGAGAAAATTCTTTCCTTGCAAAAGAGTTTGGAGGGACAAGATGTCAATACAGATCATATTGATAAGTAA 1716 0.3555 MVNMGDNYLENKNAFGSWLDDINYIFGSQDGTVLVMKDARVNMNRIFLDSNDYNYSAPEELYWSARTMSSSNGDSNIRYNLTWSFRVDSGFKYLVRLHFCEILMSVTDINQRVFDVYINNQTAEEKLDLVALAGEPFTPLYRDYVVMVPIETMLISLHPNLESKPKYADAILNGVEIIKLSDSNYNLAASFQLKNEKLHNKKKFPIFVVVVASTLGSTLGLFITFFILRRKGWTKINRGTLNSTEKGEEKIQVKVISGNCYQFTLAEIISATNNFNDDLVIGEGGFGKVYKGIIMLDEETRVAIKRAKPSSRQGLKEFQNEINFHSFYHMNLVSLLGYCQESIELILVYEYMDQGPLCDHLYKKQKQPLPWNKRLEICVGAARGIHYLHTGRKNPVIHRDIKSSNILLDQNLVPKIADFGLSRMVNSIYHTHVSTQVKGTFGYLDPEYYKRRKVSEKSDVYSFGVVLFEVLSGRPAVNSMAVEEENEKVGLVEWAMSCYQSGTIDKLVDSCLEGKIGQECLMAFVEIGVKCLANKSSERPTMGEVVSNLEKILSLQKSLEGQDVNTDHIDK* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1834 571 ProSitePatterns Protein kinases ATP-binding region signature. 281 305 IPR017441 GO:0005524
Mtr5g1834 571 SUPERFAMILY Protein kinase-like (PK-like) 253 550 IPR011009 -
Mtr5g1834 571 Pfam Protein tyrosine and serine/threonine kinase 280 549 IPR001245 GO:0004672|GO:0006468
Mtr5g1834 571 PANTHER OS07G0166700 PROTEIN 1 563 IPR045272 GO:0004714|GO:0006468
Mtr5g1834 571 Pfam Malectin-like domain 42 179 IPR024788 -
Mtr5g1834 571 Gene3D Transferase(Phosphotransferase) domain 1 352 569 - -
Mtr5g1834 571 SMART serkin_6 275 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1834 571 Gene3D - 1 181 - -
Mtr5g1834 571 CDD STKc_IRAK 281 552 - -
Mtr5g1834 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Mtr5g1834 571 ProSiteProfiles Protein kinase domain profile. 275 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1834 571 Gene3D Phosphorylase Kinase; domain 1 236 351 - -
Mtr5g1834 571 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1834 Mtr-Chr5 20560786 20562742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1834 2 560 Receptor kinase-like Gene Family AT3G51550 45.000 3.09e-164 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr5g1834 PK_Tyr_Ser-Thr 9.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1834 - - mtr:MTR_5g047070 1142.49