Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1833 ATGTTACATAAATTCATGAATGCTATCACATGCTTTGTTATGTACATATTTTTCTCAAACATTTTACCATATGTACATAGCTATGTCCCCTCAGAAAATATAGTTCTCAATTGTGGTTCTAACACATCTGAACTTGTTCAATATGATGGTAGAATCTGGAATGGTGATATTGATTCACCATATGTACCATCCTATGAAGACATCATCAATAAGTCCTTAACAGCAAAAGCACTTTCTTCAAATCTTGAATCCATTCCTGAAGTTCCTTATATGACAGCTAGAATCTTTCAATCTCAATTTACATATAGATTTAATGTAACTTCCGGTCCGAAATTCATTCGCCTTCATTTCTACCCTTTTTCTTATTTGGACTTCAACATCTCAAAAGCTTTCTTATCTGTCACTGCCGGTAACTTCACTCTTCTGCATAACTTTAGTGTTTCTCTAAATGTAGATTACTTTAACTTAGCATATTTAATGAAAGAATTCATTGTGCATGTAAAAGGAAATAGTTTGGAACTTACTTTCACTCCATCATCAAATGATTCTGATGCATATGCATTTGTGAATGGTATTGAAGTTGTTTCAATACCAAATGGTTTATACATTGGTGGTGATGATTCCCCTATTCCTTTCGCTGGCCACGATACAATTGTTTACATTTATAATGATTCAGCTATGGAAACTTTGTATAGATTGAATGTAGGAGGGGAACAAATTCTACCGAAATATGATACTGGTATGTTTCGCAATTGGGATATCGATGATGGTTACATCTTTGGGGGATATGATTTTAAACACTTCAATAAGAGCATGAAAGTTTTGTATACTGATCATGTTCCGGAGTATACTGCTCCTGATGATGTCTACCGCACGTCGCGTTCCATGGCTCCGTATTGGGCTGGATTTGTCAATTTAAATTACAATCTAACATGGTTTTTCGAAGTTGATTCTGGCTTCCTGTATCTAATTAGGCTTCATTTCTGCGAAGTTACTTATGCAATAACTAGAGTGAATGAGGTGGTTTTTTCGGTTTTTTTGAATAATCAGACAGCTGAAGAACTTGATCCATTTGCTATAGGTGGAGGACCTGGAGTTGTTATTTACAGAGACTATGTTGTGTTGGTTCCTAACGATAGTGATTCAAAGCAAGATCTTTGGTTAGACCTTCACCCTTGTGAGTATTCAAAACCTCATTTTTACGATACTTACTTGAATGGTGTTGAGATCTTTAAGCTTAGCAGTGTTGATAAGAAGAATCTTGCCGGCCTTAACCCTTCCGAAAAGAAGATTGGATCATCTGCAACGGCTACAGCGCATGTTGTTGAAAAGGTTAAAAGTTCAAAGAAACTAAAATTCATCCTCATTGGATGTGGACTTGGTGTCGTGGCAATACCGATTCTTTTGTGCTTAGTTTTATTAAAGTTTAAGGTGATTAAGCCTAGAAAGATCATGTCATGTTGTGTCCTTTCCCCTAATCAAACTGAAAAGGAGAAAAAGTCATCATCGTTTTGCTGTCAATTTTCATTGAAAGAGATAAAAGTAGCAACAAATGACTTCAATGAGGCTTTGCTGATAGGAACAGGTGGATTTGGAACTGTTTACAAAGGTAGCTTTGATGATGGTGCATCTTTTGTAGCTATAAAACGCGCCGATCTTATGTCTGAACAAGGTGTTATAGAATTTGAGACAGAGATTCATTTGCTCTCGCGTGTACGGCATAACAACCTCGTCTCACTTTTGGGCTACTGCAATGAAGATGATGAGATGATACTTGTTTATGACTTCATGTCGAATGGAAGTCTTTATGACCATCTTCATTCGAAGCAAAAAGATCAACACCAGCCTCATTTGTCATGGATTCAAAGACTTGAAATTTGCATCGGAGTTGCAAGAGGTTTGCATTACTTACACACCGGCACAAAGCATAGAATCATTCACCGCGATATCAAGACAACAAACATACTCTTAGACCATAATTGGATTGCTAAAATTTCAGATTTCGGTTTATCAAAGGAAAGTTACACTTCCTTAGGCACAACTGTCGTCAAAGGTAGCACCGGTTACCTTGATCCGGAATACTATCAACGATGCATGTTGACTGAGAAATCTGATTTATACTCACTTGGTGTGGTTTTGTTGGAAGTGCTAAGTGCAAGACAAGCTCTAAGTCCATGCGATGATGATGATGATGATGAGCATTTAAACTTGGCTGAATGGGCTAAGTTTTGCTTTGAGAATGGAAATGTGGAAGAAATCGTGGATCCAAATTTGGAAGGAAACATAGTTAAGGAGTGCCTTGAGTTATATTTAGGTATTGCTATGAAATGTTTGGCTGAAAGAGGAGTGGAGAGGCCATCCACTGGTGATGTTCTGCAGAACCTTTTTATGGCATTGCAAATTCAGAAAAATGGTGTTAATGTACAAAATGATTTACAGGACTATTCTGACTTGACACCTGGCATAGAGTTCTCTGATATTATGATGCCTGTTGGCAGGTGA 2502 0.3717 MLHKFMNAITCFVMYIFFSNILPYVHSYVPSENIVLNCGSNTSELVQYDGRIWNGDIDSPYVPSYEDIINKSLTAKALSSNLESIPEVPYMTARIFQSQFTYRFNVTSGPKFIRLHFYPFSYLDFNISKAFLSVTAGNFTLLHNFSVSLNVDYFNLAYLMKEFIVHVKGNSLELTFTPSSNDSDAYAFVNGIEVVSIPNGLYIGGDDSPIPFAGHDTIVYIYNDSAMETLYRLNVGGEQILPKYDTGMFRNWDIDDGYIFGGYDFKHFNKSMKVLYTDHVPEYTAPDDVYRTSRSMAPYWAGFVNLNYNLTWFFEVDSGFLYLIRLHFCEVTYAITRVNEVVFSVFLNNQTAEELDPFAIGGGPGVVIYRDYVVLVPNDSDSKQDLWLDLHPCEYSKPHFYDTYLNGVEIFKLSSVDKKNLAGLNPSEKKIGSSATATAHVVEKVKSSKKLKFILIGCGLGVVAIPILLCLVLLKFKVIKPRKIMSCCVLSPNQTEKEKKSSSFCCQFSLKEIKVATNDFNEALLIGTGGFGTVYKGSFDDGASFVAIKRADLMSEQGVIEFETEIHLLSRVRHNNLVSLLGYCNEDDEMILVYDFMSNGSLYDHLHSKQKDQHQPHLSWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWIAKISDFGLSKESYTSLGTTVVKGSTGYLDPEYYQRCMLTEKSDLYSLGVVLLEVLSARQALSPCDDDDDDEHLNLAEWAKFCFENGNVEEIVDPNLEGNIVKECLELYLGIAMKCLAERGVERPSTGDVLQNLFMALQIQKNGVNVQNDLQDYSDLTPGIEFSDIMMPVGR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1833 833 Pfam Protein kinase domain 524 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1833 833 Gene3D Transferase(Phosphotransferase) domain 1 597 817 - -
Mtr5g1833 833 Gene3D Phosphorylase Kinase; domain 1 485 596 - -
Mtr5g1833 833 SMART serkin_6 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1833 833 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Mtr5g1833 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Mtr5g1833 833 PANTHER FERONIA RECEPTOR-LIKE KINASE 16 833 - -
Mtr5g1833 833 Gene3D - 225 413 - -
Mtr5g1833 833 Gene3D - 33 197 - -
Mtr5g1833 833 SUPERFAMILY Protein kinase-like (PK-like) 500 797 IPR011009 -
Mtr5g1833 833 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1833 833 PANTHER OS07G0166700 PROTEIN 16 833 IPR045272 GO:0004714|GO:0006468
Mtr5g1833 833 CDD STKc_IRAK 526 795 - -
Mtr5g1833 833 Pfam Malectin-like domain 37 412 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1833 Mtr-Chr5 20556823 20559567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1833 28 812 Receptor kinase-like Gene Family AT3G51550 48.230 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mtr5g1833 Malectin_like 1e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1833 - - gmx:100776859 1121.3