Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1805 ATGTTTTCATTGTTTTCAATGCTTAACTCTTTCTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCATTCTTTTCTATCATTATTCTCCTTCTTTTTGGTTTCTCTTTCTCTTCTTCTAACCATGAAGCCTCAACTCTCTTCACATGGCTTCATACTTCATCATCACAGCCACCTTCATCTTTCTCTAACTGGAACATCAATGATCCTAATCCATGCAACTGGACCTCCATAACATGTTCATCACTCTCTTTTGTAACTGAAATCAATATACAATCCATAACTCTTCAACTTCCTATACCTTCCAACCTCTCTTCGTTTCCATTTCTCGACAAGCTTGTCATTTCTGATTCCAACCTTACTGGAACCATTCCTTCTGATATTGGTGATTGTTCTTCACTCACTGTTATTGATCTTAGTTTCAACAATCTTGTTGGTTCTATTCCTTCAAGTATTGGAAAGTTAGAGAATCTTGTAAACTTGTCTTTGAATTCAAATCAGCTTACTGGAAAAATTCCATTTGAGATAAGTGATTGCATTAGTCTCAAAAATCTTCACCTTTTTGATAATCAGTTAGGTGGGAGTATTCCGAATTCCCTCGGAAAATTGTCGAAACTTGAAGTTCTTAGAGCAGGTGGAAATAAAGATATAGTTGGGAAGATTCCTGAAGAGATTGGTGAATGTAGTAATTTGACTGTTTTAGGGCTTGCTGATACTAGAATTTCAGGCTCTTTGCCGGTTTCTTTTGGTAAACTTAAAAAGCTTCAAACATTGTCAATTTATACAACTATGCTATCTGGTGAAATTCCTAAAGAGTTAGGTAACTGTTCTGAACTTGTTGATTTGTTTCTGTATGAAAATAGCTTATCAGGCTCTATTCCTTCAGAGATTGGTAAGTTGAAGAAGCTTGAACAATTGTTTTTGTGGCAGAATGGTCTTGTTGGTGCTATTCCAAATGAGATTGGTAATTGTTCAAGTTTAAGAAACATTGATCTCTCTTTGAATTCATTATCTGGAACTATACCTTTGTCTTTAGGAAGTCTTTTAGAGCTTGAAGAGTTTATGATTAGTGATAATAATGTATCTGGTTCCATTCCTGCAACTCTTTCAAATGCTGAAAATCTTCAACAGTTGCAAGTTGATACAAATCAACTCTCAGGTTTGATTCCACCAGAGATTGGAAAGTTGTCAAATCTTTTGGTGTTTTTCGCTTGGCAGAATCAGCTTGAAGGAAGCATTCCTTCAAGTTTAGGAAACTGTAGTAAACTTCAAGCACTTGATTTGTCTAGAAATTCACTCACTGGTAGCATTCCTTCAGGACTATTTCAGCTTCAAAACCTCACAAAACTGCTTTTGATTTCAAATGATATATCAGGTTCTATACCATCAGAAATAGGTAGTTGCAAATCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGAAGCATTCCTAAGACAATAGGAAATCTCAGGAATTTGAACTTTTTAGATCTCTCTGGGAACCGTCTTTCAGCGCCGGTTCCCGATGAAATAAGAAGCTGCGTACAACTTCAAATGATAGACTTCAGCTCTAACAACTTAGAAGGCTCGCTTCCTAATTCCTTGTCATCATTATCTTCACTTCAGGTATTGGATGCATCGTTTAACAAGTTTTCAGGTCCGTTGCCGGCAAGTTTAGGTCGTCTTGTTTCATTAAGTAAGTTAATCTTTGGAAATAACTTGTTTTCTGGACCAATTCCTGCATCACTAAGCCTATGTTCAAATCTCCAACTTATTGATCTTAGTAGCAACCAGCTCACTGGAAGCATACCGGCCGAATTAGGCGAAATTGAAGCTCTAGAAATCGCTCTCAATCTTAGTTTCAATTTACTAAGTGGAACAATACCTCCTCAGATATCTTCTCTTAACAAGCTTTCCATACTAGACCTTTCACATAACCAGTTAGAAGGAGATTTGCAAACTCTTTCAGACCTAGATAACCTTGTCTCCCTCAATGTTTCTTACAACAAATTTACCGGCTATCTTCCAGATAACAAGCTTTTCAGGCAGTTAACATCGAAAGACCTCACAGGAAATCAAGGACTTTGCACTTCAGGTCAGGATTCATGCTTTGTATTGGACTCAAGCAAAACCGATATGGCTTTGAATAAGAATGAGATAAGGAAGTCGCGAAGGATTAAGCTAGCTGTTGGATTGCTGATTGCCTTAACAGTTGTGATGTTACTTATGGGGATAACTGCTGTGATCAAAGCAAGAAGAACCATTCGAGACGATGATTCAGAATTAGGAGACTCGTGGCCATGGCAATTCATACCATTCCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGTTTGATTGATAGGAATATAATCGGTAAAGGATGCTCCGGTGTTGTTTATCGAGGTGAAATGGATAATGGTGAAGTCATTGCAGTGAAGAAACTGTGGCCTATAGCAACTGATGAAGGAGAGGCGTTGAAGGATTATAAAAGTGGAGTTCGAGACTCGTTCTCAGCTGAGGTCAAAGCACTTGGATCGATCCGTCATAAGAACATTGTCAGGTTCTTAGGTTGTTGTTGGAACAAGAAAACAAGATTGCTTATTTTTGATTATATGCCAAATGGAAGTTTAAGCAGTGTACTTCATGAGAGGACTGGAAGCTCTCTTGATTGGGAACTTAGGTTCCGAATTCTGTTAGGTTCTGCAGAAGGACTTGCATATCTACATCATGACTGTGTTCCTCCTATAGTCCACAGAGATATTAAAGCCAATAACATCTTGATTGGACTTGAATTTGAACCTTATATTGCTGATTTTGGCTTGGCTAAGCTTGTTGATGATGGTGATGTCGGTCGTTCTTCCAATACAGTTGCCGGTTCCTATGGTTATATCGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGCGACGTTTATAGCTACGGTGTAGTTTTGTTAGAAGTCTTGACGGGTAAGCAACCAATTGATCCAACCATACCAGACGGTTTACACGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCAACCCTACTTTCAAGACCGGAATCAGAAATAGAAGAAATGATCCAAGCATTGGGAATAGCCTTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCAGCAATGCTCAAAGAAATAAAGAATGAAAGAGAAGAATATGCAAAATTTGATGTGCTTTTAAAAGGATCTCCTGCAAATGAAGCAAAAGTTCTCGCAACATCTTCATCGGCATCAGCCATGCAAAGTTTTAATAAAAGCAATAATACAAGTTTCTCTGTGTCTTCATTGCTTCATTCATCTTCAAGTTCAAAGATGAGCTTCAAATGA 3396 0.3778 MFSLFSMLNSFSSSSSSSSPSSFFSIIILLLFGFSFSSSNHEASTLFTWLHTSSSQPPSSFSNWNINDPNPCNWTSITCSSLSFVTEINIQSITLQLPIPSNLSSFPFLDKLVISDSNLTGTIPSDIGDCSSLTVIDLSFNNLVGSIPSSIGKLENLVNLSLNSNQLTGKIPFEISDCISLKNLHLFDNQLGGSIPNSLGKLSKLEVLRAGGNKDIVGKIPEEIGECSNLTVLGLADTRISGSLPVSFGKLKKLQTLSIYTTMLSGEIPKELGNCSELVDLFLYENSLSGSIPSEIGKLKKLEQLFLWQNGLVGAIPNEIGNCSSLRNIDLSLNSLSGTIPLSLGSLLELEEFMISDNNVSGSIPATLSNAENLQQLQVDTNQLSGLIPPEIGKLSNLLVFFAWQNQLEGSIPSSLGNCSKLQALDLSRNSLTGSIPSGLFQLQNLTKLLLISNDISGSIPSEIGSCKSLIRLRLGNNRITGSIPKTIGNLRNLNFLDLSGNRLSAPVPDEIRSCVQLQMIDFSSNNLEGSLPNSLSSLSSLQVLDASFNKFSGPLPASLGRLVSLSKLIFGNNLFSGPIPASLSLCSNLQLIDLSSNQLTGSIPAELGEIEALEIALNLSFNLLSGTIPPQISSLNKLSILDLSHNQLEGDLQTLSDLDNLVSLNVSYNKFTGYLPDNKLFRQLTSKDLTGNQGLCTSGQDSCFVLDSSKTDMALNKNEIRKSRRIKLAVGLLIALTVVMLLMGITAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQILRCLIDRNIIGKGCSGVVYRGEMDNGEVIAVKKLWPIATDEGEALKDYKSGVRDSFSAEVKALGSIRHKNIVRFLGCCWNKKTRLLIFDYMPNGSLSSVLHERTGSSLDWELRFRILLGSAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDVGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPTLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKNEREEYAKFDVLLKGSPANEAKVLATSSSASAMQSFNKSNNTSFSVSSLLHSSSSSKMSFK* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1805 1131 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 22 1124 - -
Mtr5g1805 1131 SUPERFAMILY RNI-like 281 644 - -
Mtr5g1805 1131 PRINTS Leucine-rich repeat signature 422 435 - -
Mtr5g1805 1131 PRINTS Leucine-rich repeat signature 636 649 - -
Mtr5g1805 1131 SUPERFAMILY RNI-like 618 699 - -
Mtr5g1805 1131 Gene3D Transferase(Phosphotransferase) domain 1 875 1084 - -
Mtr5g1805 1131 SUPERFAMILY Protein kinase-like (PK-like) 766 1066 IPR011009 -
Mtr5g1805 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 1124 - -
Mtr5g1805 1131 ProSiteProfiles Protein kinase domain profile. 788 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 435 530 IPR032675 -
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 243 339 IPR032675 -
Mtr5g1805 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Mtr5g1805 1131 SMART serkin_6 788 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1805 1131 Pfam Leucine rich repeat 109 167 IPR001611 GO:0005515
Mtr5g1805 1131 ProSitePatterns Protein kinases ATP-binding region signature. 794 817 IPR017441 GO:0005524
Mtr5g1805 1131 Pfam Protein tyrosine and serine/threonine kinase 792 1065 IPR001245 GO:0004672|GO:0006468
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 617 704 IPR032675 -
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 531 616 IPR032675 -
Mtr5g1805 1131 Gene3D Phosphorylase Kinase; domain 1 774 874 - -
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 340 434 IPR032675 -
Mtr5g1805 1131 ProSiteProfiles Leucine-rich repeat profile. 638 660 IPR001611 GO:0005515
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 154 242 IPR032675 -
Mtr5g1805 1131 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Mtr5g1805 1131 SUPERFAMILY RNI-like 81 385 - -
Mtr5g1805 1131 Gene3D Ribonuclease Inhibitor 42 153 IPR032675 -
Mtr5g1805 1131 SMART LRR_typ_2 299 323 IPR003591 -
Mtr5g1805 1131 SMART LRR_typ_2 539 563 IPR003591 -
Mtr5g1805 1131 SMART LRR_typ_2 636 659 IPR003591 -
Mtr5g1805 1131 SMART LRR_typ_2 154 178 IPR003591 -
Mtr5g1805 1131 SMART LRR_typ_2 419 443 IPR003591 -
Mtr5g1805 1131 SMART LRR_typ_2 491 515 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1805 Mtr-Chr5 20055635 20059738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1805 60 1101 Receptor kinase-like Gene Family AT5G56040 48.590 0.0 968
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g1805 PK_Tyr_Ser-Thr 7.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1805 - - mtr:MTR_5g045910 2046.17