Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1802 ATGTTGCCATTCCTCCTTGTTTTGTGCCTAATCTTTCCATTACTTCTCTTCTTCTTGAAACGTAGTAGAAACATTAATGCACGTCATCCACCTGGGCCTAGAGGCCTACCCATAATTGGGAATCTTCATCAGCTTGATAATTCTATTCTCTATCTTCAATTATCAAAACTTTCAAAAATTTATGGACCAATATTTTCCATGAAACTTGGTTTAAGGCCAGCAATTGTTGTTTCTTCAGATAAAATTGCCAAAGAGATATTTAAAAATAATGATCATGTGTTTTCTAATAGACCTATGTTATATGGCCAGCAAAGATTATCTTATAATGGGTCAGAAATTGTATTTTCTCAATATAGTGATTTTTGGAGAGATATAAGAAAATTTTGTGTTATTCATATATTTAGCGCTAAGCGTGTGTCATATTATTCTTCTATAAGAAAGTTTGAGGTGAAACAAATGATAAAAAATATTTCTAATCAAGCTGCTTCTTCAATTGTTACAAATTTGAGTGAGATATTAACTTCTCTTTCCAGTACAATAATTTGTAGGATTGCTTTCGGTAGGAGGTACGAGGATGAAGGAACTAAGAGGAGTAAATTCCAGGGAATGTTGCATGAGTTTGAGGCCATGATAACAGCTTTCTTTATTTCTGATTATATTCCATTCACGGGTTGGATTGATAAACTATCTGGACTTCGTGCGCGTCTCGAACGAAATTTTAAGGAGATGGATGAGTTTTACCAAGAGGTTATTGATGAACATTTGGATCCAAATAGACAACATGAAGATGATGAAGAGGTCATTGTTGATGTCTTACTACAATTGAAGAAAGAACGTTTGTTTCCAATTGATCTTACTTTTGATCACATTAAAGGAGTTCTCATGAACATGCTTGTTGCTGCAACAGATACCACATCAGCCACAACAGTATGGGCTATGACTGCATTAATAAAAAATCCAAGAGTAATGAAGAAAGTACAACAAGAGATTAGAAATTCAAAAGTTAAAAAAGAATTTATAGATGAAGATGATATACAAAATTTCTCCTACTTGAAGGCAGTGATAAAAGAGACACTGAGATTGTACTTGCCAGCCCCATTGCTTGTGCCAAGAGAAACAAGGGAAAAGTGCACTATAGGTGGCTACCAAATTCCGGCAAAGGCGGTAGTGTTTGTGAATGCTTGGGCTATTCATACAGACCCTAATGTTTGGAAAAATCCAGAAGAATTTTATCCTGAGAGATTTTTAGAAAGTTCGATAAATTTTCACGGACAAGATTTTGAACTAATTCCCTTTGGAGCCGGTCGTAGAATTTGTCCAGGTATGTCTATGGCAGTTGCATCACTCGAACTTATCCTTGCAAATCTTCTATATTCCTTTGATTGGGAATTACCAGATGGTCTAGTAAAGGAAGATATTGATACTGAAAGGTTGCCAGGACTCACTCAGCACAAAAAGAATGAGCTTTGCCTTGCAGCCAAGATTCCTATGTAG 1494 0.3554 MLPFLLVLCLIFPLLLFFLKRSRNINARHPPGPRGLPIIGNLHQLDNSILYLQLSKLSKIYGPIFSMKLGLRPAIVVSSDKIAKEIFKNNDHVFSNRPMLYGQQRLSYNGSEIVFSQYSDFWRDIRKFCVIHIFSAKRVSYYSSIRKFEVKQMIKNISNQAASSIVTNLSEILTSLSSTIICRIAFGRRYEDEGTKRSKFQGMLHEFEAMITAFFISDYIPFTGWIDKLSGLRARLERNFKEMDEFYQEVIDEHLDPNRQHEDDEEVIVDVLLQLKKERLFPIDLTFDHIKGVLMNMLVAATDTTSATTVWAMTALIKNPRVMKKVQQEIRNSKVKKEFIDEDDIQNFSYLKAVIKETLRLYLPAPLLVPRETREKCTIGGYQIPAKAVVFVNAWAIHTDPNVWKNPEEFYPERFLESSINFHGQDFELIPFGAGRRICPGMSMAVASLELILANLLYSFDWELPDGLVKEDIDTERLPGLTQHKKNELCLAAKIPM* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1802 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Mtr5g1802 497 SUPERFAMILY Cytochrome P450 30 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 Coils Coil 323 343 - -
Mtr5g1802 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 497 - -
Mtr5g1802 497 Pfam Cytochrome P450 30 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 Gene3D Cytochrome P450 22 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PANTHER CYTOCHROME P450 71B11-RELATED 3 497 - -
Mtr5g1802 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g1802 497 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1802 Mtr-Chr5 19999681 20002303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1802 4 492 Cytochrome P450 AT4G31500 45.935 2.25e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1802 - - gmx:100787727 683.715