Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1796 ATGTGTGATTATATTGAATTATATCATTTTCATGACTTATTATCGGTTTCGACGTGTGAGTGTTTGTATCGGTGCTTCGTACGGGTTGGAAATGAATACTTGATTAGTAAAGGGGATCCAGGCTACCTCATCTGTAAAAGTACTGTATCGGAATCGCGAGTGAGAACAATATACAATGCAATGGAAGAAACACAAGGGCAGTATTATGTTTCCAGTCTACATGAGTCTGATTTTAACAGGCAAGCGAATCGCAGGGCTGGTATAAAAGGCCTGAAGCAGAGAGGTCATGGAAGTCGGTCTTGGATAAAAATTGATCAGGATGGGAATTCCGAGATTGTGACACTTGACAAGGCTACGATTATGAGACATTGTTCTTTGCCTTCTAGAGATCTTCGACTATTGGATCCGAAATTCATTTATCCTTCTTCTATATTAGGAAGGGAGATGGCTATTGTTGTCAACCTTGAGCAAATCCGGTGTATAATCACCGCCGATGAAGTCATCCTCATGAATTCACTCGATGGTACTGTTGGTCGGTACAGGACAATATTATGCAATCGGCTCCAGAGAGAAAAATCTGATGATCTTCCCTTTGAATTTAGGGCACTGGAGTTAGCTCTGGAATTGACATGCACATCTTTAGATGCTCAGGTAAATGAACTGGAGATGGAAATATATCCCGTGCTGGATGAACTGGCCTCATCTATCAGTACTCTCCTTCTGGAACGTGTTCGAAGATTTAAAGGTCATCTCCTTGCTCTGACTCAGCGAGTTCAAAAGGTCCGTGATGAAATAGAACATCTCATGGATGACGATGGTGACATGGCTGAGATGTGTCTGACTGAGAAAAGGAGAAGATTAGATGCTTCTCCTTCAAATGATTGTTTTCAAATTCGTTCACCATCAGGTAGAGTGATTTCAAAATCAGCCCCTACTTCACCAGAGCGGTCACTTAGTGGGCTTCAGATGTTGCCAAGGACTTTCAGCGGTATTGGAAATTCAAGTAAATATGGTAGTTCAACGGGTTCATCTGATAACACAGAAAGGATTCAGCCGCTGGAAATGTTGCTGGAAGCGTACTTTATCGTCATTGATAATACTCTCAACACATTATCGTCGCTCAAAGAATACATTGACGACACAGAAGATTTTCTCAACATAAAATTGGGAAATATTCAAAACCTCCTGATAAAGTTTGAGATGCTTCTTACAGCAGCCACATTGGTGGCCGCAATATTTGCCGCCGTGGCAGGAGTATTTGGAATGAACTTTGAAACCTCAGTTTTTGACTACTCTTCTGGATTCAATTTGGTTTTGGTAGTTACTGGAATTGGTTGTGTAGCATTGTATTTCGCCTTACTATTCTATTTTAGATACAAAAAAGTGCTTCCAGAATGA 1398 0.4092 MCDYIELYHFHDLLSVSTCECLYRCFVRVGNEYLISKGDPGYLICKSTVSESRVRTIYNAMEETQGQYYVSSLHESDFNRQANRRAGIKGLKQRGHGSRSWIKIDQDGNSEIVTLDKATIMRHCSLPSRDLRLLDPKFIYPSSILGREMAIVVNLEQIRCIITADEVILMNSLDGTVGRYRTILCNRLQREKSDDLPFEFRALELALELTCTSLDAQVNELEMEIYPVLDELASSISTLLLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRLDASPSNDCFQIRSPSGRVISKSAPTSPERSLSGLQMLPRTFSGIGNSSKYGSSTGSSDNTERIQPLEMLLEAYFIVIDNTLNTLSSLKEYIDDTEDFLNIKLGNIQNLLIKFEMLLTAATLVAAIFAAVAGVFGMNFETSVFDYSSGFNLVLVVTGIGCVALYFALLFYFRYKKVLPE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1796 465 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 401 453 IPR045863 -
Mtr5g1796 465 Coils Coil 251 271 - -
Mtr5g1796 465 PANTHER MAGNESIUM TRANSPORTER MRS2-5 71 464 - -
Mtr5g1796 465 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 71 464 IPR039204 -
Mtr5g1796 465 Gene3D Magnesium transport protein CorA, transmembrane region 403 463 - -
Mtr5g1796 465 Gene3D - 87 172 - -
Mtr5g1796 465 CDD Mrs2_Mfm1p-like 101 462 IPR039204 -
Mtr5g1796 465 Gene3D Magnesium transport protein CorA, transmembrane region 177 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1796 Mtr-Chr5 19924489 19927886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1796 77 464 MRS2 Gene Family AT2G03620 64.646 8.72e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1796 K16075 - gmx:100803935 624.394