Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1787 ATGGATCGGGGCTCTTTCTCCCCGCGAACCCGAAATACCCGACCCAAATCCGATATCTACTCTACTTTCGTAATCCATAACGACGACGATGACGACGGAGAAACCAACCGGCGGCGGAAAACCGCCAGCGCGGAAGCACAGGAAGATCCATACGCAACAATGAAGTTCAAAGACAACGGCCACGATGACAACGACGATGATGAAGATGAAGATTCCTTTCTCCCTCCGCTTCTCAAACGTCTTCCCAAGGACTTCGGCGGCGGAGCATCGATGGATTACGACGATGACGAAGATGAATCTGGTGATTTCGGTACTATGATCGTGAAAAACGATCGGAGCCGGCAGCGAGATCGGTCTTCTTCCGGTGTGGCTTCACCGGCGGGATTGACGTGGAAGACCGGGAATTCTTCTCAGGTGACTGCTTTGAACGATGAGGATGATGATGACGGAGGTGGATTTTCGACTTTTGTGATGCGGTCGACGGTGAGGAATAGCGAGAGAGAGTCTGTGAGTGGAACGATGGTGCGAAGGACGAGCGGAAATGATGGCGGTGGTGGTTCGACGATGGAGAGAGCGATTGCGAGTATGCAAGGTGTGGGAGAGTTTGGGAAGCAGAGGAAAGGAAGTGGATCTTCACAGAATGAAGCTATAACAACGAAGGTTTCGACGAGTTCGATTCCTGATAGTGTTATTAGAGAGGATCCTACTACTAAGTATGAATTGCTCAATGAACTTGGGAAGGGTTCATATGGTGCTGTTTATAAAGCTAGGGATTATAGAACCTCTGAAATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATTCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCTAATGTTGTACGTTATCTCGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAACGTTACTGATGAAGCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGGCTTGATTATTTACACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCGGAAGTCATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTCTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCTGAGGGTGTCCCTCCAAGATCATCAGTACATCCGATGAGGGTTTTATTCATGATATCCATTGAACCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTGTATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAACCTCGACTCCGCCCTGCTGCATCTGAGATGTTGAAGCACAAATTTTTTGAAAAATGGAAAGTTGGATCTGCTGCAATGTTTCCAAAATTAGAAAAGGCAAGGCAAGTCAGGGCTTCAATGGCTTTACAGGTGCAAACTCTTGCTCCAGCTGCTGCAGGAGATCAGGAGCCAATGATAGCTTCCATACTTAATGACGAGTACGGAGATACTGTTCCATCCAGACCTCAGAACATGGGCGTTGAGGAGGCAGCTTATATCTCATCACATGGAACTACGAGGAAGCTGCAAAGGGTGGATGAGGTTGACAATAGTGAAGGTAATTTTGGCACTATGATAGTCCATGGGGATGAATTTAAGACCACACAGGATACATATTCTGCTAGTTATAAAACGGCTTTCACCAGCAGCACAGGAGGCAGATTATCTGACCCTGGGGTTGGGAGTCTAAAAGTTGGCGACATGAACACTGCCTCTTTTAGAGGATCTGGTCCTACTGCAGATACAATACAACCGGCTTTACCATCTGTTAGTAATTCAACAGAGCAGAACCTTAAAACAAAAGGCACTTATCGAGCACAAGCTGGAATTGGTAGTGATATAGGAAATAGTACACTTAAGAATGAAACAGTCAACCGCAAATTCGCTTTACAAGATAAGCTTTGGTCCATTTATGCCGCTGGTAATACAGTGCCCATACCATTCTTAAGGGCGACAGATATATCGCCTATTGCTCTCCTTTCAGACAATGTGCTTGGCGGCATGCAACAGGATACAGGTGGAACTGGAACAGTAGAAGCATTGCAAGAGCTTTTTGGTGGCGATGGGCAGTCCAAGAAGGGTCGCAGAGGAATAAATGAGATGCCACTTCCTCCAAGCATTTGCCAAAGATTGACCTCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTATCATAAGATGTGTTACGAAGATATGCCACTACAGGAGTTGCAAGCAACCCAGGAGCAGCGAACTATTCAAAATCTCTCTGACACGCTTAGAACCATTCTTCGGTTGTAG 2475 0.4545 MDRGSFSPRTRNTRPKSDIYSTFVIHNDDDDDGETNRRRKTASAEAQEDPYATMKFKDNGHDDNDDDEDEDSFLPPLLKRLPKDFGGGASMDYDDDEDESGDFGTMIVKNDRSRQRDRSSSGVASPAGLTWKTGNSSQVTALNDEDDDDGGGFSTFVMRSTVRNSERESVSGTMVRRTSGNDGGGGSTMERAIASMQGVGEFGKQRKGSGSSQNEAITTKVSTSSIPDSVIREDPTTKYELLNELGKGSYGAVYKARDYRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEALDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPAASEMLKHKFFEKWKVGSAAMFPKLEKARQVRASMALQVQTLAPAAAGDQEPMIASILNDEYGDTVPSRPQNMGVEEAAYISSHGTTRKLQRVDEVDNSEGNFGTMIVHGDEFKTTQDTYSASYKTAFTSSTGGRLSDPGVGSLKVGDMNTASFRGSGPTADTIQPALPSVSNSTEQNLKTKGTYRAQAGIGSDIGNSTLKNETVNRKFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDTGGTGTVEALQELFGGDGQSKKGRRGINEMPLPPSICQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1787 824 MobiDBLite consensus disorder prediction 202 221 - -
Mtr5g1787 824 ProSiteProfiles Protein kinase domain profile. 239 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1787 824 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 187 814 - -
Mtr5g1787 824 MobiDBLite consensus disorder prediction 162 187 - -
Mtr5g1787 824 MobiDBLite consensus disorder prediction 23 62 - -
Mtr5g1787 824 Gene3D Transferase(Phosphotransferase) domain 1 235 524 - -
Mtr5g1787 824 ProSitePatterns Protein kinases ATP-binding region signature. 245 268 IPR017441 GO:0005524
Mtr5g1787 824 MobiDBLite consensus disorder prediction 1 150 - -
Mtr5g1787 824 Pfam Protein kinase domain 239 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1787 824 SMART serkin_6 239 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1787 824 MobiDBLite consensus disorder prediction 162 185 - -
Mtr5g1787 824 CDD STKc_MAP4K3_like 238 493 - -
Mtr5g1787 824 MobiDBLite consensus disorder prediction 119 141 - -
Mtr5g1787 824 SUPERFAMILY Protein kinase-like (PK-like) 236 494 IPR011009 -
Mtr5g1787 824 MobiDBLite consensus disorder prediction 102 118 - -
Mtr5g1787 824 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 187 814 - -
Mtr5g1787 824 MobiDBLite consensus disorder prediction 206 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1787 Mtr-Chr5 19737931 19750140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1787 7 824 MAP Kinase Kinase Kinase Kinase AT1G69220 59.220 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Mtr5g1787 Pkinase 2.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1787 - - gmx:100804995 1269.6