Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1770 ATGGATTCAGTTTCATCTTCTTCTTCTTCTTCTGCATCCAACAAGACATCATTATTAACATTAGAAGAATGGAACGGTTCATCTCCCACTAAACTCTCTAAAACTTTCACTATCAAAGCTTCTTCTTCCTCTTTCTCCATTCGAAGATCTGGTGCACGCTTTACTCATGTTTGGAGACGATTTCTTCAAGCATTTGTTCCTGAGGGGTTTCCAAGCAGTGTTACTCCAGATTATGTTCCATTTCAAATTTGGGATTTACTGCAGGGCCTGTCTACGTATATTAGGACCATGCTTTCTACCCAGGCTCTCTTGAGTGCTATTGGAGTTGGTGAGAAATCAGCTACAGTCATTGGTGCCACTTTTCAGTGGTTTTTGAGAGATCTAACTGGCATGCTTGGGGGAATCTTATTCACATTCTACCAGGGATCAAATCTTGATAGCAATGCTAAAATGTGGCGTTTGGTTGCAGATCTCATGAATGATCTTGGTATGCTAATGGACCTCATTTCACCATTGTTTCCATCAGCATTTGTTTTTATTGTTTGTTTAGGAAGCATATCAAGATCTTTCACTGGCGTTGCAAGTGGAGCCACTAGAGCAGCTTTGACTCAACATTTTGCTCTTCAGGATAATGCTGCCGATATTTCTGCTAAGGAAGGAAGTCAAGAAACTGTGGCGACTATGATTGGCATGGCACTGGGAATGCTTGTTGCTCGCATTACCACTGGTCACCCACTAGCAATTTGGTTTTCTTTTTTGTCTCTGACTCTGTTTCATATGTATGCAAACTACCGAGCTGTTCAATGCTTGTCATTGAACTCTTTAAACCCTGAAAGGAGCTCTATTCTTTTGCAGCGTTTCATGGAATCCAGACAAGTTCTCTCCCCTAAACAGGTCTCTCCACTGGAGCATGTTTTACCGATACAACTAACCTCGATGAGTTCAAAGAAGGTTAATTCCTTGGATTCAAAAGTACGTCTAGGCACAAGGATTTCTTCATTTGATGAAATGGAAATTAAGGAGCATTTGCTTTCTTTAGCATCTTACTACGCAAAAGCCAAGTACATACTAGTGGAAAAGAAAGGAATCATCGACGTTATTGTTCATAAAGATTCAAGTAGTGCTGATGTCCTAAAGTCATTTATTCATGCTCTTGTCCTCGCAAATAATGTTTATAAAGGAAAATCTCTGCATTCAGACAGCCAAATGTGGATGGAAAACCAGTATGAAGTATTTATTCAGAAGCTCAAGTCATTAGGGTGGAAAACAGAACGTCTTCTATCATCACCTATCATATGGAGGGCAAATTGGATACACGAACCGTCCGAAGAAAAAATCGACTAG 1344 0.4018 MDSVSSSSSSSASNKTSLLTLEEWNGSSPTKLSKTFTIKASSSSFSIRRSGARFTHVWRRFLQAFVPEGFPSSVTPDYVPFQIWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLFPSAFVFIVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMALGMLVARITTGHPLAIWFSFLSLTLFHMYANYRAVQCLSLNSLNPERSSILLQRFMESRQVLSPKQVSPLEHVLPIQLTSMSSKKVNSLDSKVRLGTRISSFDEMEIKEHLLSLASYYAKAKYILVEKKGIIDVIVHKDSSSADVLKSFIHALVLANNVYKGKSLHSDSQMWMENQYEVFIQKLKSLGWKTERLLSSPIIWRANWIHEPSEEKID* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1770 447 PANTHER RUS1 FAMILY PROTEIN C16ORF58 9 447 IPR006968 -
Mtr5g1770 447 PANTHER PROTEIN ROOT UVB SENSITIVE 3 9 447 - -
Mtr5g1770 447 Pfam Vitamin B6 photo-protection and homoeostasis 55 290 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1770 Mtr-Chr5 19549751 19556763 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1770 - - mtr:MTR_5g044720 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1770 5 19549751 19556763 Mtr5g1770 5 19549751 19556763 ECH