Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr5g1768 | ATGAATGGTCCAGCAGCAAAAGTAGATGATCAGCAAGAGCCTGAACCATGCACACCTCAGAACAATCATAAAGAGCCTGATCCGGACGCATCAGAACTAGTACAACTTTTGGACCGAAGTCAGCTTCCCAGATTAAACCCCTCCAACGCTGCTGATCAAGCCAATGCAGAAGCCACTATGAGAAAAGCACGAGTCTCAGTCCGTGCTAGATCAGAAGCCCACATGATCAATGATGGATGCCAATGGCGAAAATACGGACAAAAAATGGCTAAAGGAAACCCTTGTCCTCGTGCGTATTATAGATGCACAATGGCTCTTGGTTAA | 324 | 0.463 | MNGPAAKVDDQQEPEPCTPQNNHKEPDPDASELVQLLDRSQLPRLNPSNAADQANAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALG* | 108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr5g1768 | 107 | SMART | WRKY_cls | 76 | 106 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr5g1768 | 107 | ProSiteProfiles | WRKY domain profile. | 71 | 107 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr5g1768 | 107 | Pfam | WRKY DNA -binding domain | 77 | 104 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr5g1768 | 107 | SUPERFAMILY | WRKY DNA-binding domain | 69 | 104 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr5g1768 | 107 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 14 | 107 | IPR044810 | GO:0003700 | |
Mtr5g1768 | 107 | Gene3D | WRKY domain | 63 | 107 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr5g1768 | 107 | PANTHER | WRKY TRANSCRIPTION FACTOR 31-RELATED | 14 | 107 | - | - | |
Mtr5g1768 | 107 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr5g1768 | Mtr-Chr5 | 19539162 | 19540096 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr5g1768 | 48 | 107 | WRKY Transcription Factor Family | AT4G04450 | 85.000 | 1.04e-31 | 113 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Mtr5g1768 | WRKY | 4.3e-12 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr5g1768 | - | - | mtr:MTR_6g038890 | 227.639 |