Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1759 ATGGCTCTTCTTGCTTATTTTGTGCTCTTCCTTTCTCTGACTGGATATTCAAGTGGTGCTCTTTATTGTGTGTGTAAAGATGGTGTGGGAGATCAAAATCTTCAAAAAGCAATAGATTATGCTTGTGGTGCTGGAGCTGATTGTACACAAATTCAGCAAAATGGGCCATGTTTTCAGCCAAATACTATTAAAGATCACTGCAATTATGCTGTTAATAGCTATTTCCAGAAAAAGGGTCAAGCTCAAGGAGCTTGTGATTTTGCTGGTATGGCTACTCCAAGTCAAACTCCACCAACTTCTTCAACATCTTCATGTGCTTATCCTTCAAGTGGCAATACAGGAGGGGGTACCACCACAACCCCAGCAACTAATACACCTGTAGGCATATCACCACCATCCACCGTAACTCCAACTACTCCTACAGGTACAACACCAAGCACCGGGACCGGCACACCAACCGGAACCGGCACAGGCACAGGCACAGGTACGGGCACGGGCACTCCAACTGGAACAGGCACGGGCACAGGCATGGGCACACCAACTGGAACAGGCACAGGAACAGGTATAGGAACTGGAACAGGTACAGGAACTGGAACTGGTACAACCACAGGTGGTCCTAATGTGTTTGGAATAAGTCCAACAACATCATCATCTGGTAATAGTGGCTTCAGTGATCCTAATGGAGAAGGGGTTCAATTAAAAAAATGCACTTATGTGTTATTAACATCCCTTGTTTTTACTATATGGCTAGCAGCAGCAATAAGAGACTAA 771 0.4514 MALLAYFVLFLSLTGYSSGALYCVCKDGVGDQNLQKAIDYACGAGADCTQIQQNGPCFQPNTIKDHCNYAVNSYFQKKGQAQGACDFAGMATPSQTPPTSSTSSCAYPSSGNTGGGTTTTPATNTPVGISPPSTVTPTTPTGTTPSTGTGTPTGTGTGTGTGTGTGTPTGTGTGTGMGTPTGTGTGTGIGTGTGTGTGTGTTTGGPNVFGISPTTSSSGNSGFSDPNGEGVQLKKCTYVLLTSLVFTIWLAAAIRD* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1759 256 Gene3D - 16 113 - -
Mtr5g1759 256 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 1 175 - -
Mtr5g1759 256 Pfam X8 domain 22 92 IPR012946 -
Mtr5g1759 256 MobiDBLite consensus disorder prediction 92 224 - -
Mtr5g1759 256 SMART X8_cls 21 107 IPR012946 -
Mtr5g1759 256 PANTHER BETA-1,3 GLUCANASE 1 175 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1759 Mtr-Chr5 19476791 19479824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1759 22 99 Glycoside Hydrolase AT2G01630 43.038 8.82e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1759 - - mtr:MTR_5g044530 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1759 5 19476791 19479824 Mtr5g1759 5 19476791 19479824 ECH