Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1753 ATGGCGTCACAAATGTCGATTCTCTATCGAACGCGTTCTCTTCTCACAAAACCCAATTTCACAATCAAATCAATCTCAACATTCCCATATCTCAATCAAGAACCCGAACTTGTAGACCCCACACCACCACCACCAACAGAATCATCACTCCCACCAAATCCAGCGTCAGGATCCCCACTCTACAACGAAAATTGGCGCAACCCAGTTCCAAAAACTTCATCTTTAACCCAATTTGGTCATTTCACACGCGCTTCAGTTTCTGAAACCTATGATTCCAACGCGCTTTTGAATGTTTTTGGTGATTGGGTAGCTTCACAACGTTGGGGTGATGTGAAGGAAATGTTTGAAGGATGGGTTAGGAGTTTGGATAAAAATGGGAAACCTAATAAACCTGATGTTAATTTGTTTAATCATTATATTAGGGCTAATCTTATGATTGGTGCTTCTGCTGCTGATTTGCTTGATTTGTTAGCTCAGATGGAACAATTTGATATTTTGCCGAATACAGCGAGTTTTAATTTGGTTCTTAAGGCTATGCATCAGGCTAGAGAGACTCTTGCTGCTGAGAAGCTTCTTGAACGGATGCTGCAATCTGGAAATGAAGCTTTTCCTGATGATGAATCATTTGACTTGGTCATTGGAATGCTCTTTGCAACAGATCAGATTGATACTGCATTCAAATATATAGATTCAACTCTAAAACATGGCAACAAGTTGTCAATGGATTTATTTATGAAATGTGTGAGGAGTTGTGTCAAACAAGGAAGGCTTGATACGTTGGTGGCAATAATTGAAAAGTGCAGGGCAACAGATCAAAACAAAGCCCTTTGCCCCTCCTGGAAATTGTGCATTTTCATAGCTGAAGTTGCAATTCGAGCGGATAATAGCAAGTTAGCCTATTATGGCCTGGAGTTTATGGCTCGATGGATTGTAAAGGGTGAACGTGCAAGACCTCCTGTGTTGCTTTCTGTAGATGAAGGTTTAGCCGTGTCAGCTCTGATGACTGCAGGTAGAACCTATAATTCTGAGCTGCTAGGAGCAGCATGGGCTGTTTTGGACCGTTCGTTGCGTAAAAAGAAGCTTCCAAATCCAGAATCTTATCTCGCAAAGATATATGCCCTTGCATCATTGGGCAATCTACAAAAGGCATTTGGCACTCTGCATGATTATGAGTCTGCTTATGGAAATTCTGATCAAGAAGCTGACGACTTATTCTGCCCATTTACTTCTTTACATCCATTGTCTGTGGCATGCTCAAAGAAGGGTTTTGAGACTTTAGATACTGTTTATTTTCAACTGGAGAATTTAAGCCATGCTGAGCGTCCATACAAGTCTGTTGCTGCGCTAAACTGCGTCATTGTAGGATCTGCGAACATATGGGACCTTGATCGAGCTTACCAAACTTTTGAATCAATTGCTTCTACTTTTGGGTTGACTCATAATATTCATTCGTATAATGGGCTGATGTATGCATTTGGGAAGGTCAATAAGGCAGATGAAGTTTCAAAGGTGTTTGGGTACATAGTAAATTCGGGTCTCAAGCCTAATGCAAAGTCGTATTGCCTGCTTATCGATGCCCACCTGATTAATAGGGATGTCAAATCTGCTATGGGAGTGCTTGATGATATGATAGCTGCTGGATTTGAACCGATGAAAGGGACACTAAAAAAGATCAGAAGACGATGCATACGAGAGTTCGACACTGAAAGCGATGAACGACTGGAGTCACTCGCTCTATCTTACAATTACCGAATGGGTTCTGAAGGCCGACGAAACATGCTGTTTAATCTTAATTACAGTACTGAAATGGCTTGA 1815 0.4132 MASQMSILYRTRSLLTKPNFTIKSISTFPYLNQEPELVDPTPPPPTESSLPPNPASGSPLYNENWRNPVPKTSSLTQFGHFTRASVSETYDSNALLNVFGDWVASQRWGDVKEMFEGWVRSLDKNGKPNKPDVNLFNHYIRANLMIGASAADLLDLLAQMEQFDILPNTASFNLVLKAMHQARETLAAEKLLERMLQSGNEAFPDDESFDLVIGMLFATDQIDTAFKYIDSTLKHGNKLSMDLFMKCVRSCVKQGRLDTLVAIIEKCRATDQNKALCPSWKLCIFIAEVAIRADNSKLAYYGLEFMARWIVKGERARPPVLLSVDEGLAVSALMTAGRTYNSELLGAAWAVLDRSLRKKKLPNPESYLAKIYALASLGNLQKAFGTLHDYESAYGNSDQEADDLFCPFTSLHPLSVACSKKGFETLDTVYFQLENLSHAERPYKSVAALNCVIVGSANIWDLDRAYQTFESIASTFGLTHNIHSYNGLMYAFGKVNKADEVSKVFGYIVNSGLKPNAKSYCLLIDAHLINRDVKSAMGVLDDMIAAGFEPMKGTLKKIRRRCIREFDTESDERLESLALSYNYRMGSEGRRNMLFNLNYSTEMA* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1753 604 Pfam PPR repeat family 481 526 IPR002885 -
Mtr5g1753 604 TIGRFAM PPR: pentatricopeptide repeat domain 483 517 IPR002885 -
Mtr5g1753 604 TIGRFAM PPR: pentatricopeptide repeat domain 519 550 IPR002885 -
Mtr5g1753 604 MobiDBLite consensus disorder prediction 36 52 - -
Mtr5g1753 604 PANTHER OS07G0599000 PROTEIN 1 603 IPR044605 -
Mtr5g1753 604 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 516 550 IPR002885 -
Mtr5g1753 604 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Mtr5g1753 604 MobiDBLite consensus disorder prediction 33 60 - -
Mtr5g1753 604 Pfam Pentatricopeptide repeat domain 130 179 IPR002885 -
Mtr5g1753 604 Gene3D Tetratricopeptide repeat domain 97 295 IPR011990 GO:0005515
Mtr5g1753 604 Gene3D Tetratricopeptide repeat domain 345 588 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1753 362 550 Glycosyltransferase AT1G05670 23.232 1.23e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1753 - - gmx:100800731 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1753 5 19380122 19386981 Mtr5g1753 5 19380122 19386981 ECH