Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1741 ATGGTGAAGATTTGTTGCATTGGAGCTGGCTATGTTGGTGGTCCAACAATGGCTGTGATTGCTTTGAAGTGTCCTGAGATTGAGGTAGCTGTTGTTGATATCGCCACGCCTCGAATCAATGCTTGGAACAGTGACCACTTGCCTATATATGAGCCTGGTCTTGATGATGTGGTGAAGAAGTGCAGAGGAAAGAACCTTTTCTTCAGCACTGATGTTGAGAAACATGTTGCCGAGGCTAACATCGTGTTTGTTTCGGTGAACACTCCGACCAAGACTCAGGGTCTTGGAGCTGGCAAAGCAGCTGATCTCACTTACTGGGAGAGTGCTGCTAGAATGATTGCTGATGTTTCAAAATCGGACAAAATTGTCGTCGAGAAATCGACTGTTCCGGTTAAAACTGCTGAGGCAATTGAGAGGATTCTGACTCACAATAGGAAAGGGATTAATTTCACTATTTTGTCTAACCCTGAGTTTCTTGCCGAGGGTACAGCTATCAAAGATCTGTTCAATCCCGATCGAGTTCTTATTGGAGGTAGGGAAACCCCTGAAGGTCAAAAAGCGATCCATGCTTTGAGAGATGTTTATGCTCATTGGGTGCCGTTAGATCGAATCCTTTGCACCAATTTGTGGTCTGCTGAACTATCAAAGCTTGCTGCCAATGCTTTCTTGGCACAGAGGATCTCCTCTGTAAACGCCATGTCAGCACTATGTGAGGCAACCGGTGCTGATGTTTCTCAGGTTTCCCACTCAATCGGCACTGACTCGAGAATTGGACCAAAGTTCTTGAATGCTAGTGTTGGTTTTGGTGGATCTTGCTTTCAGAAGGATATTCTGAACTTGGTCTATATTTGCGAATGCAACGGCCTTCCCGAGGTGGCTAACTACTGGAAACAAGTCATTAAGGTGAATGACTACCAGAAAGCTCGGTTCGTGAACCGAATTGTTTCTTCGATGTTCAACACCGTTTCAGGAAAAAAGATCGCTGTTTTGGGATTTGCTTTCAAGAAGGACACCGGTGACACCAGGGAGACTCCTGCAATCGATGTGTGCAAGGGTTTATTGGGAGACAAGGCTAAGTTGAGCATATATGATCCTCAAGTTTCTGAAGAGCAAATCTTAAAGGATTTGGCAATGAAGAAATTTGATTGGGATCATCCTGCTCATCTTCAACCAACAAGTCCAACAACTTCGAAAAAGGAAGTATCTGTTGTTTGGGACGCGTACGAGGCAATAAAGGATTCACATGGTATCTGCATTTTGACCGAGTGGGACGAGTTCAAGAACCTTGATTACCAAAAAGTTTTTGACAACATGCAGAAGCCTGCATTTATCTTTGATGGAAGGAATGTTGTCGATGTTAAAAAGCTGAGAGACATCGGTTTTATCGTTTATTCCATTGGAAAACCACTAGATGCTTGGCTCAAGGACATGCCTGCAGTGGCTTAA 1446 0.4419 MVKICCIGAGYVGGPTMAVIALKCPEIEVAVVDIATPRINAWNSDHLPIYEPGLDDVVKKCRGKNLFFSTDVEKHVAEANIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFTILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGQKAIHALRDVYAHWVPLDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKARFVNRIVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVSEEQILKDLAMKKFDWDHPAHLQPTSPTTSKKEVSVVWDAYEAIKDSHGICILTEWDEFKNLDYQKVFDNMQKPAFIFDGRNVVDVKKLRDIGFIVYSIGKPLDAWLKDMPAVA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1741 481 PIRSF UDPglc_DH_euk 1 481 IPR028356 GO:0003979
Mtr5g1741 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 452 IPR014027 GO:0016616|GO:0051287
Mtr5g1741 481 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 449 IPR017476 GO:0016616
Mtr5g1741 481 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Mtr5g1741 481 PIRSF UDPglc_GDPman_dh 2 468 IPR017476 GO:0016616
Mtr5g1741 481 SMART UDPG_MGDP_dh_C_a_2_a 328 453 IPR014027 GO:0016616|GO:0051287
Mtr5g1741 481 Gene3D - 1 208 - -
Mtr5g1741 481 Gene3D - 241 479 - -
Mtr5g1741 481 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 214 IPR036291 -
Mtr5g1741 481 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 481 - -
Mtr5g1741 481 Gene3D - 209 240 - -
Mtr5g1741 481 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 464 IPR036220 -
Mtr5g1741 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Mtr5g1741 481 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 481 IPR028356 GO:0003979
Mtr5g1741 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1741 Mtr-Chr5 19250544 19253199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1741 K00012 - gmx:100799142 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1741 5 19250544 19253199 Mtr5g1741 5 19250544 19253199 ECH
Mtr5g1741 5 19250544 19253199 Mtr7g0254 7 3905412 3908477 ECH
Mtr4g2664 4 40226401 40229235 Mtr5g1741 5 19250544 19253199 PCT