Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1726 ATGAACATGAACATGAACATGGTAGTAGACACCGAGAAGAAGCAAGAAACCATAAAAGAGAAAGATTTATTCAAAGCAGCAGAAGAAGGAGATTCTTCAACCTTTGAATCATTGTCTTCTGAATCACTCTCCAAAGCACTTTCTCTAAGAAACGAAGACGATCGTTCTCTTCTTCATGTTGCCGCTTCTTTTGGTCACTCTAAGGTGGTGAAGATATTGTTGTCTTGTGATGCATCTGCTGAAGTGATAAATAGTGGTGATGAAGAAGGGTGGGCACCGCTTCATTCTGCTGCCAGCATTGGGAATTCGGAGATTCTGGAAGCTTTGTTGAACAAAGGAGCTGATGTTAATATTAAAAACAATGGGGGACGCGCTGCCTTACACTATGCAGCCAGCAAAGGTCGGATGAAGATTGCTGAAATACTCATCTCCCATAATGCCAACATTAATATAAAGGACAAGGTTGGTTCCACCCCGTTGCATCGGGCAGCTAGCACTGGGCATTCTGAGTTGTGTGAACTTTTGATTGAAGAAGGAGCAGATGTTGATGCTGTTGATAGAGCTGGTCAAACTCCTCTAATGAGTGCCGTGATTTGTTATAACAAAGAGGTAGCACTCCTTCTTATAAGGCATGGAGCAGATGTGGATGTGGAGGACAAGGAAGGGTACACAGTGCTTGGTCGAATTACTGATGACGAGTTTAGATCAATATTGATTGATGCTGCCAAGACCATGCTTGAATGA 744 0.4288 MNMNMNMVVDTEKKQETIKEKDLFKAAEEGDSSTFESLSSESLSKALSLRNEDDRSLLHVAASFGHSKVVKILLSCDASAEVINSGDEEGWAPLHSAASIGNSEILEALLNKGADVNIKNNGGRAALHYAASKGRMKIAEILISHNANINIKDKVGSTPLHRAASTGHSELCELLIEEGADVDAVDRAGQTPLMSAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRITDDEFRSILIDAAKTMLE* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1726 247 Gene3D - 8 156 IPR036770 -
Mtr5g1726 247 PRINTS Ankyrin repeat signature 156 171 IPR002110 GO:0005515
Mtr5g1726 247 PRINTS Ankyrin repeat signature 204 218 IPR002110 GO:0005515
Mtr5g1726 247 Gene3D - 157 245 IPR036770 -
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat profile. 155 187 IPR002110 GO:0005515
Mtr5g1726 247 Pfam Ankyrin repeat 189 219 IPR002110 GO:0005515
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat profile. 53 85 IPR002110 GO:0005515
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat region circular profile. 89 121 - -
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat region circular profile. 188 220 - -
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat region circular profile. 122 154 - -
Mtr5g1726 247 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 22 139 - -
Mtr5g1726 247 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED 82 233 - -
Mtr5g1726 247 SMART ANK_2a 89 118 IPR002110 GO:0005515
Mtr5g1726 247 SMART ANK_2a 53 82 IPR002110 GO:0005515
Mtr5g1726 247 SMART ANK_2a 188 217 IPR002110 GO:0005515
Mtr5g1726 247 SMART ANK_2a 155 184 IPR002110 GO:0005515
Mtr5g1726 247 SMART ANK_2a 122 151 IPR002110 GO:0005515
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat region circular profile. 155 187 - -
Mtr5g1726 247 Pfam Ankyrin repeats (3 copies) 23 120 IPR002110 GO:0005515
Mtr5g1726 247 Pfam Ankyrin repeats (3 copies) 123 185 IPR002110 GO:0005515
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat region circular profile. 53 84 - -
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat profile. 188 220 IPR002110 GO:0005515
Mtr5g1726 247 ProSiteProfiles Ankyrin repeat profile. 122 154 IPR002110 GO:0005515
Mtr5g1726 247 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C 82 233 - -
Mtr5g1726 247 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2C 22 139 - -
Mtr5g1726 247 SUPERFAMILY Ankyrin repeat 22 227 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1726 29 226 Miscellaneous Gene Families AT1G07710 29.612 1.19e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1726 K06694 - gmx:100795610 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1726 5 19097799 19103227 Mtr5g1726 5 19097799 19103227 ECH