Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1700 ATGGACCAACCACCGTGGAAGGAAGAAGAAGCGGCGGTTGGCGGTGGTGATGGGGGACCACCACAGCGGCCCACCTTAACTCTGCCGCCACGTACGGATGTACTTTTCAGCGGTGGTTTTAGCCCTGGTCCTATGACTCTTCTCTCTAACTTATTTGCTGATAGTGATGACGGCAAGTCTTTCTCTCAGCTTCTCGCCGGTTCCATGGTGTCTCCGGCACCGCTAACCGCCGGGGGGCTTGATTCATCTGGCTTCTTTTCACATCCTCAGGTATCCTTTGGAATGACACAGCAGCAACCACTGGCACAGGTCTCGGCTCACGAAGGACCGTCCAACACTAATATGCATAACCAAGCCGAACATTTATCATATGTACCAACTTCCACCGATCATGCTCCTCTCTCCGAACAAAGGCTGCAGCCTTCTTCGTTGAATGTCGATAAGCCTGCTGATGATGGCTACAACTGGAGGAAATACGGACAGAAACAGGTGAAAGGTAGCGAGTTTCCTCGAAGTTATTACAAGTGCACGCATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCGCTTGCTGGTCATATAACCGCAATTATTTATAAAGGAGAGCACAATCATCTACTTCCGAATCCTAATAAGCGATCAAAAGACACTATTACTTCAAATGAAAATTCAAATATGCAAGGGAGTGCCGATTCAACTTATCAACGGATGACTTCAAACTCAATGTCTAAGATGGAACCTGAATCTAGTCAGGCAACAGTTGAACATCTATCTGGAACTAGTGATAGTGAGGATGTAGGTGATCGTGAAACAGAAGTGCATGAGAAAAGAATTGAGCCCGACTCCAAAAGGAGAAATACAGAAGTCACAGTCTCAAATCCAACAACTTCTTCACATAGGACTGTCACAGAGCCTAAAATCATCGTGCAAACTACCAGTGAAGTTGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTCAAAGGAAACCCTTATCCTAGGAGCTATTACAAATGTACAACACCAGGTTGTAACGTTCGAAAGCATGTAGAGAGGGCTTCCACGGATCCTAAAGCAGTCATAACAACATATGAAGGAAAACATAATCATGATGTTCCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAATAATGCTTCACAGTTAAAATCGCAAAATACCATTTCTGAGAAGACTAGTTTTGGTAGCATCGGTATTGGCGAGGGCAATGAGCAACAACCTGTTGCTCGTCTAAGGCTGAAGGAAGAGCAGATAACTTAA 1302 0.4485 MDQPPWKEEEAAVGGGDGGPPQRPTLTLPPRTDVLFSGGFSPGPMTLLSNLFADSDDGKSFSQLLAGSMVSPAPLTAGGLDSSGFFSHPQVSFGMTQQQPLAQVSAHEGPSNTNMHNQAEHLSYVPTSTDHAPLSEQRLQPSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLAGHITAIIYKGEHNHLLPNPNKRSKDTITSNENSNMQGSADSTYQRMTSNSMSKMEPESSQATVEHLSGTSDSEDVGDRETEVHEKRIEPDSKRRNTEVTVSNPTTSSHRTVTEPKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTISEKTSFGSIGIGEGNEQQPVARLRLKEEQIT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1700 433 MobiDBLite consensus disorder prediction 97 116 - -
Mtr5g1700 433 MobiDBLite consensus disorder prediction 1 35 - -
Mtr5g1700 433 SMART WRKY_cls 319 378 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 SMART WRKY_cls 150 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 ProSiteProfiles WRKY domain profile. 314 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 ProSiteProfiles WRKY domain profile. 151 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 141 432 - -
Mtr5g1700 433 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 79 128 - -
Mtr5g1700 433 Gene3D WRKY domain 304 380 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 Gene3D WRKY domain 138 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 128 IPR044810 GO:0003700
Mtr5g1700 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 141 432 IPR044810 GO:0003700
Mtr5g1700 433 MobiDBLite consensus disorder prediction 206 301 - -
Mtr5g1700 433 MobiDBLite consensus disorder prediction 212 261 - -
Mtr5g1700 433 SUPERFAMILY WRKY DNA-binding domain 148 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 Pfam WRKY DNA -binding domain 320 377 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 Pfam WRKY DNA -binding domain 151 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr5g1700 433 MobiDBLite consensus disorder prediction 262 287 - -
Mtr5g1700 433 MobiDBLite consensus disorder prediction 127 156 - -
Mtr5g1700 433 MobiDBLite consensus disorder prediction 127 144 - -
Mtr5g1700 433 SUPERFAMILY WRKY DNA-binding domain 311 379 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1700 Mtr-Chr5 18799141 18803107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1700 23 433 WRKY Transcription Factor Family AT2G03340 51.440 9.71e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr5g1700 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1700 - - gmx:100127369 626.706