Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1687 ATGAAAACTCTCAAACCCCATCACCACCAATTATCAACCTTCATCTTCATCCTACTCTTCCCTTTCCTTAAATCACAAACTGCAAGACAACAAAACAACACAGGCTACACTTGTCCCAACAACAACAACAACAACAACAACACTTATCCATGTCAAACCTATGTTTACTACAAAGCAACACCACCAAATTACCTCGATTTAGCTACCATTTCAGACCTTTTCCAACTTAGTCGTTTAATGATCTCAAAACCAAGCAATATCTCTTCACCTTCTTCTCCTCTACTCCCTAACCAACCCCTTCTCATTCCCTTAACTTGTTCATGCAACTTCATCAACACCACTTTTGGTTCCATTTCTTACTCTAACATCACTTACACCATCAAACCAAACGATACCTTTTTCCTTGTTTCAACTATAAACTTCCAAAACCTCACTACTTATCCTTCTGTTCAAGTTGTTAATCCTAATCTTGTTGCTACTAATCTCTCTATTGGTGATAATGCTGTGTTTCCTATTTTTTGTAAGTGTCCTGATAAAACCAAAACAAATTCTAGTTTCATGATTTCTTATGTTGTTCAACCTCATGATAATGTTTCTTCTATTGCTTCTATGTTTGGAACAAGTGAAAAGTCTATAGTTGATGTTAATGGTGAAAGGTTATATGATTATGATACTATTTTTGTTCCTGTTACTGAATTACCTGTCTTGAAACAACCTAGTACTATTGTTCCTTCTCCTGCTCCAAGAGGAAATTCTGATGATGGTGATGATGATGATGATAAGAGTGGAATTGTTAAAGGGTTGGCTATTGGATTAGGAATTTTAGGGTTTTTGTTGATTTTGGTTATAGTGTTTTGGTTTTACAGAGAGGTTCTGTTTAAGAAGGAAAAGAAAGGAAAGGGTTTGTATTTTGGAGATAAAGGGTATAAAGGGAATGATGAAAAGAAGAAGAAAATGGATGTGAATTTTATGGCTAATGTTTCTGATTGTTTAGATAAGTATAGAGTTTTTGGATTTGATGAATTGGTTGAAGCTACTGATGGGTTTGATGAAAGGTTTTTGATTCAAGGGTCTGTTTATAAAGGTGAAATTGATGGACAAGTTTATGCAATTAAGAAGATGAAGTGGAATGCTTATGAAGAACTCAAAATTTTGCAGAAGGTAAACCATGGGAATTTGGTGAAGTTGGAAGGATTTTGCATAGAACCAGAAGAATCAAATTGCTATCTAGTCTATGAATATGTTGAAAATGGATCTCTTTACTCATGGTTACATGAAGACAAAAACGAAAAGTTAAATTGGGTAACAAGGCTAAGAATAGCCGTTGACATTGCCAATGGTTTATTGTACATTCATGAACACACAAGACCAAAGGTTGTACACAAAGACATTAAAAGTAGCAACATTCTCTTGGACTCAAACATGAGAGCTAAAATTGCAAATTTCGGTCTTGCAAAGAGCGGAATTAACGCGATTACAATGCACATTGTAGGAACACAAGGGTACATTTCACCCGAATATCTAGCCGATGGTATCGTGTCAACGAAGATGGATGTGTTTTCTTTTGGTATTGTGCTGCTTGAATTGATTTCTGGGAAGGAAGTTATTGATGAGGAGGGGAATGTTTTGTGGGCTAGTGCTATAAAAACATTTGAAGTGAAAAATGAACAAGAAAAAGCTAGGAGACTTAAGGAATGGTTGGATAGGACTATGTTAAAGGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTCATGTTGCAATTGCTTGTTTGAATAGAGATCCATCAAAGAGACCTAGCATTATAGATATTGTTTATTCACTTAGTAAATGTGAAGAAGCAGGATTTGAGCTCTCAGATGATGGGTTTGGTTCAGAAAGGTTGGTGGCTAGGTGA 1899 0.357 MKTLKPHHHQLSTFIFILLFPFLKSQTARQQNNTGYTCPNNNNNNNNTYPCQTYVYYKATPPNYLDLATISDLFQLSRLMISKPSNISSPSSPLLPNQPLLIPLTCSCNFINTTFGSISYSNITYTIKPNDTFFLVSTINFQNLTTYPSVQVVNPNLVATNLSIGDNAVFPIFCKCPDKTKTNSSFMISYVVQPHDNVSSIASMFGTSEKSIVDVNGERLYDYDTIFVPVTELPVLKQPSTIVPSPAPRGNSDDGDDDDDKSGIVKGLAIGLGILGFLLILVIVFWFYREVLFKKEKKGKGLYFGDKGYKGNDEKKKKMDVNFMANVSDCLDKYRVFGFDELVEATDGFDERFLIQGSVYKGEIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEPEESNCYLVYEYVENGSLYSWLHEDKNEKLNWVTRLRIAVDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNMRAKIANFGLAKSGINAITMHIVGTQGYISPEYLADGIVSTKMDVFSFGIVLLELISGKEVIDEEGNVLWASAIKTFEVKNEQEKARRLKEWLDRTMLKETCSMESLMGVLHVAIACLNRDPSKRPSIIDIVYSLSKCEEAGFELSDDGFGSERLVAR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1687 632 ProSiteProfiles LysM domain profile. 188 235 IPR018392 -
Mtr5g1687 632 SUPERFAMILY Protein kinase-like (PK-like) 335 609 IPR011009 -
Mtr5g1687 632 ProSiteProfiles Protein kinase domain profile. 331 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1687 632 Gene3D Phosphorylase Kinase; domain 1 319 414 - -
Mtr5g1687 632 MobiDBLite consensus disorder prediction 239 259 - -
Mtr5g1687 632 PANTHER - 26 625 - -
Mtr5g1687 632 SMART LysM_2 189 229 IPR018392 -
Mtr5g1687 632 SMART LysM_2 124 171 IPR018392 -
Mtr5g1687 632 Gene3D Transferase(Phosphotransferase) domain 1 415 621 - -
Mtr5g1687 632 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 26 625 - -
Mtr5g1687 632 Pfam Protein kinase domain 359 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1687 632 Pfam LysM domain 190 228 IPR018392 -
Mtr5g1687 632 Gene3D LysM domain 176 235 IPR036779 -
Mtr5g1687 632 CDD LysM 188 228 IPR018392 -
Mtr5g1687 632 SMART serkin_6 353 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g1687 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1687 Mtr-Chr5 18579272 18584427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1687 35 611 Receptor kinase-like Gene Family AT2G23770 34.228 5.70e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr5g1687 Pkinase 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1687 - - lang:109352405 828.165